1W37
2-keto-3-deoxygluconate(KDG) aldolase of Sulfolobus solfataricus
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005829 | cellular_component | cytosol |
A | 0008674 | molecular_function | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity |
A | 0008675 | molecular_function | 2-dehydro-3-deoxy-phosphogluconate aldolase activity |
A | 0008700 | molecular_function | 4-hydroxy-2-oxoglutarate aldolase activity |
A | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
A | 0009436 | biological_process | glyoxylate catabolic process |
A | 0016829 | molecular_function | lyase activity |
B | 0005829 | cellular_component | cytosol |
B | 0008674 | molecular_function | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity |
B | 0008675 | molecular_function | 2-dehydro-3-deoxy-phosphogluconate aldolase activity |
B | 0008700 | molecular_function | 4-hydroxy-2-oxoglutarate aldolase activity |
B | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
B | 0009436 | biological_process | glyoxylate catabolic process |
B | 0016829 | molecular_function | lyase activity |
C | 0005829 | cellular_component | cytosol |
C | 0008674 | molecular_function | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity |
C | 0008675 | molecular_function | 2-dehydro-3-deoxy-phosphogluconate aldolase activity |
C | 0008700 | molecular_function | 4-hydroxy-2-oxoglutarate aldolase activity |
C | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
C | 0009436 | biological_process | glyoxylate catabolic process |
C | 0016829 | molecular_function | lyase activity |
D | 0005829 | cellular_component | cytosol |
D | 0008674 | molecular_function | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity |
D | 0008675 | molecular_function | 2-dehydro-3-deoxy-phosphogluconate aldolase activity |
D | 0008700 | molecular_function | 4-hydroxy-2-oxoglutarate aldolase activity |
D | 0008840 | molecular_function | 4-hydroxy-tetrahydrodipicolinate synthase activity |
D | 0009436 | biological_process | glyoxylate catabolic process |
D | 0016829 | molecular_function | lyase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA D1297 |
Chain | Residue |
D | PRO7 |
D | GLY42 |
D | THR43 |
D | THR44 |
D | TYR130 |
D | LYS155 |
site_id | AC2 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A1295 |
Chain | Residue |
A | SER243 |
A | HOH2187 |
D | ARG106 |
D | MET107 |
D | SER108 |
D | HIS111 |
A | GLY240 |
A | SER241 |
A | LEU242 |
site_id | AC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL B1295 |
Chain | Residue |
B | GLY240 |
B | SER241 |
B | LEU242 |
B | SER243 |
C | ARG106 |
C | MET107 |
C | SER108 |
C | HIS111 |
C | HOH2102 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B1296 |
Chain | Residue |
B | LYS86 |
B | HOH2235 |
B | HOH2236 |
D | CYS120 |
D | HIS125 |
D | PRO126 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL C1295 |
Chain | Residue |
A | LYS110 |
C | ILE93 |
C | HIS125 |
C | PRO126 |
C | HOH2097 |
C | HOH2234 |
C | HOH2236 |
D | ASP268 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C1296 |
Chain | Residue |
C | CYS120 |
C | PRO126 |
C | CYS150 |
C | HOH2116 |
C | HOH2143 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL C1297 |
Chain | Residue |
B | ARG106 |
B | MET107 |
B | SER108 |
B | HIS111 |
C | GLY240 |
C | SER241 |
C | LEU242 |
C | SER243 |
site_id | AC8 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL D1295 |
Chain | Residue |
A | MET107 |
A | SER108 |
A | HIS111 |
A | HOH2087 |
D | PHE239 |
D | GLY240 |
D | SER241 |
D | LEU242 |
D | SER243 |
D | HOH2203 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL D1296 |
Chain | Residue |
D | LYS114 |
D | THR118 |
D | GLU121 |
D | HOH2226 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Schiff-base intermediate with substrate => ECO:0000269|PubMed:15265860 |
Chain | Residue | Details |
A | LYS155 | |
B | LYS155 | |
C | LYS155 | |
D | LYS155 |
site_id | SWS_FT_FI2 |
Number of Residues | 12 |
Details | BINDING: |
Chain | Residue | Details |
A | THR43 | |
D | THR43 | |
D | TYR130 | |
D | LYS155 | |
A | TYR130 | |
A | LYS155 | |
B | THR43 | |
B | TYR130 | |
B | LYS155 | |
C | THR43 | |
C | TYR130 | |
C | LYS155 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | SITE: Proton shuttle => ECO:0000250 |
Chain | Residue | Details |
A | TYR130 | |
B | TYR130 | |
C | TYR130 | |
D | TYR130 |