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1W37

2-keto-3-deoxygluconate(KDG) aldolase of Sulfolobus solfataricus

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0008674molecular_function2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
A0008675molecular_function2-dehydro-3-deoxy-phosphogluconate aldolase activity
A0008700molecular_function4-hydroxy-2-oxoglutarate aldolase activity
A0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
A0009436biological_processglyoxylate catabolic process
A0016829molecular_functionlyase activity
B0005829cellular_componentcytosol
B0008674molecular_function2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
B0008675molecular_function2-dehydro-3-deoxy-phosphogluconate aldolase activity
B0008700molecular_function4-hydroxy-2-oxoglutarate aldolase activity
B0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
B0009436biological_processglyoxylate catabolic process
B0016829molecular_functionlyase activity
C0005829cellular_componentcytosol
C0008674molecular_function2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
C0008675molecular_function2-dehydro-3-deoxy-phosphogluconate aldolase activity
C0008700molecular_function4-hydroxy-2-oxoglutarate aldolase activity
C0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
C0009436biological_processglyoxylate catabolic process
C0016829molecular_functionlyase activity
D0005829cellular_componentcytosol
D0008674molecular_function2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
D0008675molecular_function2-dehydro-3-deoxy-phosphogluconate aldolase activity
D0008700molecular_function4-hydroxy-2-oxoglutarate aldolase activity
D0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
D0009436biological_processglyoxylate catabolic process
D0016829molecular_functionlyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA D1297
ChainResidue
DPRO7
DGLY42
DTHR43
DTHR44
DTYR130
DLYS155

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A1295
ChainResidue
ASER243
AHOH2187
DARG106
DMET107
DSER108
DHIS111
AGLY240
ASER241
ALEU242

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B1295
ChainResidue
BGLY240
BSER241
BLEU242
BSER243
CARG106
CMET107
CSER108
CHIS111
CHOH2102

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B1296
ChainResidue
BLYS86
BHOH2235
BHOH2236
DCYS120
DHIS125
DPRO126

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL C1295
ChainResidue
ALYS110
CILE93
CHIS125
CPRO126
CHOH2097
CHOH2234
CHOH2236
DASP268

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C1296
ChainResidue
CCYS120
CPRO126
CCYS150
CHOH2116
CHOH2143

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL C1297
ChainResidue
BARG106
BMET107
BSER108
BHIS111
CGLY240
CSER241
CLEU242
CSER243

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL D1295
ChainResidue
AMET107
ASER108
AHIS111
AHOH2087
DPHE239
DGLY240
DSER241
DLEU242
DSER243
DHOH2203

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL D1296
ChainResidue
DLYS114
DTHR118
DGLU121
DHOH2226

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Schiff-base intermediate with substrate => ECO:0000269|PubMed:15265860
ChainResidueDetails
ALYS155
BLYS155
CLYS155
DLYS155

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING:
ChainResidueDetails
ATHR43
DTHR43
DTYR130
DLYS155
ATYR130
ALYS155
BTHR43
BTYR130
BLYS155
CTHR43
CTYR130
CLYS155

site_idSWS_FT_FI3
Number of Residues4
DetailsSITE: Proton shuttle => ECO:0000250
ChainResidueDetails
ATYR130
BTYR130
CTYR130
DTYR130

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PDB entries from 2024-03-27

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