1W2W
Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0044237 | biological_process | obsolete cellular metabolic process |
| A | 0044249 | biological_process | obsolete cellular biosynthetic process |
| B | 0044237 | biological_process | obsolete cellular metabolic process |
| B | 0044249 | biological_process | obsolete cellular biosynthetic process |
| E | 0044237 | biological_process | obsolete cellular metabolic process |
| E | 0044249 | biological_process | obsolete cellular biosynthetic process |
| F | 0044237 | biological_process | obsolete cellular metabolic process |
| F | 0044249 | biological_process | obsolete cellular biosynthetic process |
| I | 0044237 | biological_process | obsolete cellular metabolic process |
| I | 0044249 | biological_process | obsolete cellular biosynthetic process |
| J | 0044237 | biological_process | obsolete cellular metabolic process |
| J | 0044249 | biological_process | obsolete cellular biosynthetic process |
| M | 0044237 | biological_process | obsolete cellular metabolic process |
| M | 0044249 | biological_process | obsolete cellular biosynthetic process |
| N | 0044237 | biological_process | obsolete cellular metabolic process |
| N | 0044249 | biological_process | obsolete cellular biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE SO4 A1212 |
| Chain | Residue |
| A | MSE48 |
| A | ARG51 |
| A | GLY52 |
| A | ARG106 |
| A | HOH2098 |
| B | GLN237 |
| B | ASP280 |
| B | LYS291 |
| B | HOH2038 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE SO4 E1212 |
| Chain | Residue |
| E | MSE48 |
| E | ARG51 |
| E | GLY52 |
| E | ARG106 |
| E | HOH2132 |
| F | GLN237 |
| F | ASP280 |
| F | LYS291 |
| F | HOH2050 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE SO4 I1212 |
| Chain | Residue |
| I | MSE48 |
| I | ARG51 |
| I | GLY52 |
| I | ARG106 |
| I | HOH2115 |
| J | GLN237 |
| J | LYS291 |
| J | HOH2051 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE SO4 M1212 |
| Chain | Residue |
| M | MSE48 |
| M | ARG51 |
| M | GLY52 |
| M | ARG106 |
| M | HOH2071 |
| N | GLN237 |
| N | LYS291 |
| N | HOH2038 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Site: {"description":"Transition state stabilizer","evidences":[{"source":"HAMAP-Rule","id":"MF_03119","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton donor","evidences":[{"source":"HAMAP-Rule","id":"MF_03119","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
