Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VZQ

Complex of thrombin with designed inhibitor 7165

Functional Information from GO Data
ChainGOidnamespacecontents
H0004252molecular_functionserine-type endopeptidase activity
H0005509molecular_functioncalcium ion binding
H0006508biological_processproteolysis
H0007596biological_processblood coagulation
L0004252molecular_functionserine-type endopeptidase activity
L0005576cellular_componentextracellular region
L0006508biological_processproteolysis
L0007596biological_processblood coagulation
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE SHY H 1256
ChainResidue
HHIS57
HGLU192
HSER214
HTRP215
HGLY216
HGLY219
HGLY226
HHOH2149
HHOH2314
HHOH2333
HHOH2334
HTYR60
HTRP60
HTRP96
HGLU97
HASN98
HLEU99
HASP189
HALA190

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA H 1257
ChainResidue
HARG221
HLYS224
HHOH2260
HHOH2261
HHOH2305
HHOH2312

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA H 1258
ChainResidue
HLYS169
HTHR172
HPHE204
HHOH2232
HHOH2233
HHOH2246
HHOH2287

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR CHAIN I OF HIRUDIN VARIANT-2
ChainResidue
HPHE34
HGLN38
HARG73
HTHR74
HALA75
HTYR76
HGLN151
HHOH2099
HHOH2103
HHOH2108
IHOH2001
IHOH2002
IHOH2003
IHOH2004
IHOH2005
IHOH2006
IHOH2007

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
HLEU53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
ChainResidueDetails
HASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Sulfotyrosine => ECO:0000250
ChainResidueDetails
ITYR9
HASP102
HLYS202

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
ChainResidueDetails
HASN60

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HHIS57

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HSER195
HGLY196

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HSER195
HGLY193

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HSER195
HHIS57

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HSER195
HHIS57
HGLY196

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HSER195
HGLY193
HHIS57

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon