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1VYO

Crystal structure of avidin

Functional Information from GO Data
ChainGOidnamespacecontents
A0005576cellular_componentextracellular region
A0009374molecular_functionbiotin binding
A0019731biological_processantibacterial humoral response
B0005576cellular_componentextracellular region
B0009374molecular_functionbiotin binding
B0019731biological_processantibacterial humoral response
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 501
ChainResidue
ATRP70
ATHR77
ATRP97
ATRP110
AASN118
AGOL502
AHOH2008

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 502
ChainResidue
AALA39
ATRP70
APHE72
ASER73
ASER75
AGOL501
AVAL37
ATHR38

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 503
ChainResidue
ALEU14
AASP109
ATRP110
AGLY116
AILE117
AHOH2066
AHOH2067
AHOH2068
BLYS94

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 504
ChainResidue
AALA22
AASN24
AGLU28
ATHR30
BHOH2053

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 501
ChainResidue
BTRP70
BTHR77
BTRP97
BASN118
BGOL502
BHOH2080

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 502
ChainResidue
BVAL37
BTHR38
BALA39
BTRP70
BSER73
BSER75
BLEU99
BGOL501

Functional Information from PROSITE/UniProt
site_idPS00577
Number of Residues15
DetailsAVIDIN_1 Avidin-like domain signature. DdwKAtrVGiNiFTR
ChainResidueDetails
AASP108-ARG122

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING:
ChainResidueDetails
ATYR33
BTYR33

site_idSWS_FT_FI2
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:5100763
ChainResidueDetails
AASN17
BASN17

218853

PDB entries from 2024-04-24

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