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1VYA

Identification and characterization of the first plant G-quadruplex binding protein encoded by the Zea mays L. nucleoside diphosphate1 gene, ZmNDPK1

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003677molecular_functionDNA binding
A0004550molecular_functionnucleoside diphosphate kinase activity
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0006183biological_processGTP biosynthetic process
A0006228biological_processUTP biosynthetic process
A0006241biological_processCTP biosynthetic process
A0009142biological_processnucleoside triphosphate biosynthetic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0034214biological_processprotein hexamerization
B0000166molecular_functionnucleotide binding
B0003677molecular_functionDNA binding
B0004550molecular_functionnucleoside diphosphate kinase activity
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0006183biological_processGTP biosynthetic process
B0006228biological_processUTP biosynthetic process
B0006241biological_processCTP biosynthetic process
B0009142biological_processnucleoside triphosphate biosynthetic process
B0016301molecular_functionkinase activity
B0016740molecular_functiontransferase activity
B0034214biological_processprotein hexamerization
C0000166molecular_functionnucleotide binding
C0003677molecular_functionDNA binding
C0004550molecular_functionnucleoside diphosphate kinase activity
C0005524molecular_functionATP binding
C0005634cellular_componentnucleus
C0006183biological_processGTP biosynthetic process
C0006228biological_processUTP biosynthetic process
C0006241biological_processCTP biosynthetic process
C0009142biological_processnucleoside triphosphate biosynthetic process
C0016301molecular_functionkinase activity
C0016740molecular_functiontransferase activity
C0034214biological_processprotein hexamerization
D0000166molecular_functionnucleotide binding
D0003677molecular_functionDNA binding
D0004550molecular_functionnucleoside diphosphate kinase activity
D0005524molecular_functionATP binding
D0005634cellular_componentnucleus
D0006183biological_processGTP biosynthetic process
D0006228biological_processUTP biosynthetic process
D0006241biological_processCTP biosynthetic process
D0009142biological_processnucleoside triphosphate biosynthetic process
D0016301molecular_functionkinase activity
D0016740molecular_functiontransferase activity
D0034214biological_processprotein hexamerization
E0000166molecular_functionnucleotide binding
E0003677molecular_functionDNA binding
E0004550molecular_functionnucleoside diphosphate kinase activity
E0005524molecular_functionATP binding
E0005634cellular_componentnucleus
E0006183biological_processGTP biosynthetic process
E0006228biological_processUTP biosynthetic process
E0006241biological_processCTP biosynthetic process
E0009142biological_processnucleoside triphosphate biosynthetic process
E0016301molecular_functionkinase activity
E0016740molecular_functiontransferase activity
E0034214biological_processprotein hexamerization
F0000166molecular_functionnucleotide binding
F0003677molecular_functionDNA binding
F0004550molecular_functionnucleoside diphosphate kinase activity
F0005524molecular_functionATP binding
F0005634cellular_componentnucleus
F0006183biological_processGTP biosynthetic process
F0006228biological_processUTP biosynthetic process
F0006241biological_processCTP biosynthetic process
F0009142biological_processnucleoside triphosphate biosynthetic process
F0016301molecular_functionkinase activity
F0016740molecular_functiontransferase activity
F0034214biological_processprotein hexamerization
G0000166molecular_functionnucleotide binding
G0003677molecular_functionDNA binding
G0004550molecular_functionnucleoside diphosphate kinase activity
G0005524molecular_functionATP binding
G0005634cellular_componentnucleus
G0006183biological_processGTP biosynthetic process
G0006228biological_processUTP biosynthetic process
G0006241biological_processCTP biosynthetic process
G0009142biological_processnucleoside triphosphate biosynthetic process
G0016301molecular_functionkinase activity
G0016740molecular_functiontransferase activity
G0034214biological_processprotein hexamerization
H0000166molecular_functionnucleotide binding
H0003677molecular_functionDNA binding
H0004550molecular_functionnucleoside diphosphate kinase activity
H0005524molecular_functionATP binding
H0005634cellular_componentnucleus
H0006183biological_processGTP biosynthetic process
H0006228biological_processUTP biosynthetic process
H0006241biological_processCTP biosynthetic process
H0009142biological_processnucleoside triphosphate biosynthetic process
H0016301molecular_functionkinase activity
H0016740molecular_functiontransferase activity
H0034214biological_processprotein hexamerization
I0000166molecular_functionnucleotide binding
I0003677molecular_functionDNA binding
I0004550molecular_functionnucleoside diphosphate kinase activity
I0005524molecular_functionATP binding
I0005634cellular_componentnucleus
I0006183biological_processGTP biosynthetic process
I0006228biological_processUTP biosynthetic process
I0006241biological_processCTP biosynthetic process
I0009142biological_processnucleoside triphosphate biosynthetic process
I0016301molecular_functionkinase activity
I0016740molecular_functiontransferase activity
I0034214biological_processprotein hexamerization
J0000166molecular_functionnucleotide binding
J0003677molecular_functionDNA binding
J0004550molecular_functionnucleoside diphosphate kinase activity
J0005524molecular_functionATP binding
J0005634cellular_componentnucleus
J0006183biological_processGTP biosynthetic process
J0006228biological_processUTP biosynthetic process
J0006241biological_processCTP biosynthetic process
J0009142biological_processnucleoside triphosphate biosynthetic process
J0016301molecular_functionkinase activity
J0016740molecular_functiontransferase activity
J0034214biological_processprotein hexamerization
K0000166molecular_functionnucleotide binding
K0003677molecular_functionDNA binding
K0004550molecular_functionnucleoside diphosphate kinase activity
K0005524molecular_functionATP binding
K0005634cellular_componentnucleus
K0006183biological_processGTP biosynthetic process
K0006228biological_processUTP biosynthetic process
K0006241biological_processCTP biosynthetic process
K0009142biological_processnucleoside triphosphate biosynthetic process
K0016301molecular_functionkinase activity
K0016740molecular_functiontransferase activity
K0034214biological_processprotein hexamerization
L0000166molecular_functionnucleotide binding
L0003677molecular_functionDNA binding
L0004550molecular_functionnucleoside diphosphate kinase activity
L0005524molecular_functionATP binding
L0005634cellular_componentnucleus
L0006183biological_processGTP biosynthetic process
L0006228biological_processUTP biosynthetic process
L0006241biological_processCTP biosynthetic process
L0009142biological_processnucleoside triphosphate biosynthetic process
L0016301molecular_functionkinase activity
L0016740molecular_functiontransferase activity
L0034214biological_processprotein hexamerization
Functional Information from PROSITE/UniProt
site_idPS00469
Number of Residues9
DetailsNDPK Nucleoside diphosphate kinase (NDPK) active site signature. NviHGSDSI
ChainResidueDetails
AASN112-ILE120

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsActive site: {"description":"Pros-phosphohistidine intermediate","evidences":[{"source":"PROSITE-ProRule","id":"PRU10030","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25679041","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues72
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P22392","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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