1VK2
Crystal structure of Uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004844 | molecular_function | uracil DNA N-glycosylase activity |
A | 0006281 | biological_process | DNA repair |
A | 0006974 | biological_process | DNA damage response |
A | 0016787 | molecular_function | hydrolase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SF4 A 201 |
Chain | Residue |
A | CYS18 |
A | CYS21 |
A | HIS24 |
A | CYS89 |
A | CYS105 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE UNL A 301 |
Chain | Residue |
A | HOH319 |
A | GLU46 |
A | GLY47 |
A | HIS161 |
A | HOH305 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2002","submissionDatabase":"PDB data bank","title":"Crystal structure of uracil-DNA glycosylase from T. maritima.","authors":["Rajashankar K.R.","Dodatko T.","Thirumuruhan R.A.","Sandigursky M.","Bresnik A.","Chance M.R.","Franklin W.A.","Almo S.C."]}},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"APR-2004","submissionDatabase":"PDB data bank","title":"Crystal structure of uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution.","authoringGroup":["Joint center for structural genomics (JCSG)"]}},{"source":"PDB","id":"1L9G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VK2","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 5 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q5SKC5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1mug |
Chain | Residue | Details |
A | GLY47 |