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1VK2

Crystal structure of Uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004844molecular_functionuracil DNA N-glycosylase activity
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SF4 A 201
ChainResidue
ACYS18
ACYS21
AHIS24
ACYS89
ACYS105

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE UNL A 301
ChainResidue
AHOH319
AGLU46
AGLY47
AHIS161
AHOH305

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2002","submissionDatabase":"PDB data bank","title":"Crystal structure of uracil-DNA glycosylase from T. maritima.","authors":["Rajashankar K.R.","Dodatko T.","Thirumuruhan R.A.","Sandigursky M.","Bresnik A.","Chance M.R.","Franklin W.A.","Almo S.C."]}},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"APR-2004","submissionDatabase":"PDB data bank","title":"Crystal structure of uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution.","authoringGroup":["Joint center for structural genomics (JCSG)"]}},{"source":"PDB","id":"1L9G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1VK2","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q5SKC5","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1mug
ChainResidueDetails
AGLY47

239492

PDB entries from 2025-07-30

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