Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VEL

Mycobacterium smegmatis Dps tetragonal form

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0008199molecular_functionferric iron binding
A0009295cellular_componentnucleoid
A0016491molecular_functionoxidoreductase activity
A0016722molecular_functionoxidoreductase activity, acting on metal ions
A0046872molecular_functionmetal ion binding
B0003677molecular_functionDNA binding
B0008199molecular_functionferric iron binding
B0009295cellular_componentnucleoid
B0016491molecular_functionoxidoreductase activity
B0016722molecular_functionoxidoreductase activity, acting on metal ions
B0046872molecular_functionmetal ion binding
C0003677molecular_functionDNA binding
C0008199molecular_functionferric iron binding
C0009295cellular_componentnucleoid
C0016491molecular_functionoxidoreductase activity
C0016722molecular_functionoxidoreductase activity, acting on metal ions
C0046872molecular_functionmetal ion binding
D0003677molecular_functionDNA binding
D0008199molecular_functionferric iron binding
D0009295cellular_componentnucleoid
D0016491molecular_functionoxidoreductase activity
D0016722molecular_functionoxidoreductase activity, acting on metal ions
D0046872molecular_functionmetal ion binding
E0003677molecular_functionDNA binding
E0008199molecular_functionferric iron binding
E0009295cellular_componentnucleoid
E0016491molecular_functionoxidoreductase activity
E0016722molecular_functionoxidoreductase activity, acting on metal ions
E0046872molecular_functionmetal ion binding
F0003677molecular_functionDNA binding
F0008199molecular_functionferric iron binding
F0009295cellular_componentnucleoid
F0016491molecular_functionoxidoreductase activity
F0016722molecular_functionoxidoreductase activity, acting on metal ions
F0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 201
ChainResidue
AHIS39
AASP66
AGLU70
AHOH448

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD B 202
ChainResidue
BHIS39
BHOH405
DASP66
DGLU70

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD E 203
ChainResidue
EASP66
EGLU70
EHOH444
CHIS39

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD D 204
ChainResidue
BASP66
BGLU70
DHIS39
DHOH447

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD C 205
ChainResidue
CASP66
CGLU70
CHOH445
EHIS39

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD F 206
ChainResidue
FHIS39
FASP66
FGLU70
FHOH449

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CD A 207
ChainResidue
AASP136
BASP136
CASP136

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CD D 208
ChainResidue
DASP136
EASP136
FASP136

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD D 209
ChainResidue
CASP119
CHOH495
DASP129
DHOH496

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD C 210
ChainResidue
CGLU118
CHOH493
CHOH494
FGLU128

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 211
ChainResidue
AGLU128
ASO4601
BGLU128
CGLU128

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA D 212
ChainResidue
DGLU128
DSO4602
EGLU128

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 601
ChainResidue
AGLN135
ANA211
BGLN135
CGLN135

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 602
ChainResidue
DGLN135
DNA212
EGLN135
FGLN135

Functional Information from PROSITE/UniProt
site_idPS00818
Number of Residues17
DetailsDPS_1 Dps protein family signature 1. HWnVvGpnfigVHemiD
ChainResidueDetails
AHIS39-ASP55

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15178251","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16030020","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"description":"in other chain","evidences":[{"source":"PubMed","id":"15178251","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16030020","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15178251","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"16030020","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon