Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003911 | molecular_function | DNA ligase (NAD+) activity |
A | 0006260 | biological_process | DNA replication |
A | 0006281 | biological_process | DNA repair |
B | 0003677 | molecular_function | DNA binding |
B | 0003911 | molecular_function | DNA ligase (NAD+) activity |
B | 0006260 | biological_process | DNA replication |
B | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 701 |
Chain | Residue |
A | CYS409 |
A | CYS412 |
A | CYS425 |
A | CYS430 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 2701 |
Chain | Residue |
B | CYS2409 |
B | CYS2412 |
B | CYS2425 |
B | CYS2430 |
site_id | AC3 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE AMP A 700 |
Chain | Residue |
A | GLU116 |
A | HIS117 |
A | LYS118 |
A | VAL119 |
A | GLU174 |
A | TYR226 |
A | HIS256 |
A | LYS291 |
A | LYS315 |
A | LEU85 |
site_id | AC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE AMP B 2700 |
Chain | Residue |
B | HOH1100 |
B | LEU2085 |
B | ASN2087 |
B | GLU2116 |
B | HIS2117 |
B | LYS2118 |
B | VAL2119 |
B | GLU2174 |
B | TYR2226 |
B | LYS2315 |
Functional Information from PROSITE/UniProt
site_id | PS01055 |
Number of Residues | 30 |
Details | DNA_LIGASE_N1 NAD-dependent DNA ligase signature 1. KVDGLSvnlyYeeGvLvfgaTRGDGevGEE |
Chain | Residue | Details |
A | LYS118-GLU147 | |
site_id | PS01056 |
Number of Residues | 16 |
Details | DNA_LIGASE_N2 NAD-dependent DNA ligase signature 2. VGRTGrVTpVgvLePV |
Chain | Residue | Details |
A | VAL332-VAL347 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | LYS118 | |
B | LYS2118 | |
Chain | Residue | Details |
A | ASP34 | |
B | GLU2174 | |
B | TYR2226 | |
B | LYS2291 | |
A | SER84 | |
A | ARG139 | |
A | GLU174 | |
A | TYR226 | |
A | LYS291 | |
B | ASP2034 | |
B | SER2084 | |
B | ARG2139 | |
Chain | Residue | Details |
A | GLU116 | |
B | GLU2116 | |
Chain | Residue | Details |
A | LYS315 | |
B | LYS2315 | |
Chain | Residue | Details |
A | CYS409 | |
A | CYS412 | |
A | CYS425 | |
A | CYS430 | |
B | CYS2409 | |
B | CYS2412 | |
B | CYS2425 | |
B | CYS2430 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1b04 |
Chain | Residue | Details |
A | LYS118 | |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1b04 |
Chain | Residue | Details |
B | LYS2118 | |
site_id | CSA3 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1b04 |
Chain | Residue | Details |
A | LYS118 | |
A | ARG201 | |
A | ASP120 | |
A | LYS315 | |
site_id | CSA4 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1b04 |
Chain | Residue | Details |
B | ARG2201 | |
B | LYS2118 | |
B | LYS2315 | |
B | ASP2120 | |
site_id | MCSA1 |
Number of Residues | 9 |
Details | M-CSA 450 |
Chain | Residue | Details |
A | GLU116 | electrostatic stabiliser |
A | LYS118 | covalent catalysis |
A | ASP120 | electrostatic stabiliser |
A | TYR226 | electrostatic stabiliser |
A | LYS315 | electrostatic stabiliser |
A | CYS409 | metal ligand |
A | CYS412 | metal ligand |
A | CYS425 | metal ligand |
A | CYS430 | metal ligand |
site_id | MCSA2 |
Number of Residues | 9 |
Details | M-CSA 450 |
Chain | Residue | Details |
B | GLU2116 | electrostatic stabiliser |
B | LYS2118 | covalent catalysis |
B | ASP2120 | electrostatic stabiliser |
B | TYR2226 | electrostatic stabiliser |
B | LYS2315 | electrostatic stabiliser |
B | CYS2409 | metal ligand |
B | CYS2412 | metal ligand |
B | CYS2425 | metal ligand |
B | CYS2430 | metal ligand |