1V0E
Endosialidase of Bacteriophage K1F
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0016996 | molecular_function | endo-alpha-(2,8)-sialidase activity |
B | 0016996 | molecular_function | endo-alpha-(2,8)-sialidase activity |
C | 0016996 | molecular_function | endo-alpha-(2,8)-sialidase activity |
D | 0016996 | molecular_function | endo-alpha-(2,8)-sialidase activity |
E | 0016996 | molecular_function | endo-alpha-(2,8)-sialidase activity |
F | 0016996 | molecular_function | endo-alpha-(2,8)-sialidase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PO4 B1685 |
Chain | Residue |
A | PRO829 |
A | THR830 |
B | GLU818 |
B | GLY819 |
B | HOH2478 |
B | HOH2534 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 C1685 |
Chain | Residue |
C | GLU818 |
C | GLY819 |
C | HOH2456 |
C | HOH2515 |
B | PRO829 |
B | THR830 |
B | HOH2482 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PO4 C1686 |
Chain | Residue |
A | GLY819 |
A | HOH2470 |
C | PRO829 |
C | THR830 |
C | HOH2516 |
site_id | AC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 D1685 |
Chain | Residue |
D | GLU818 |
D | GLY819 |
D | HOH2468 |
D | HOH2529 |
E | PRO829 |
E | THR830 |
E | HOH2406 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 F1685 |
Chain | Residue |
D | ALA805 |
E | GLU818 |
E | GLY819 |
E | HOH2401 |
F | PRO829 |
F | THR830 |
F | HOH2508 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PO4 F1686 |
Chain | Residue |
D | PRO829 |
D | THR830 |
D | HOH2471 |
E | ALA805 |
F | GLU818 |
F | GLY819 |
F | HOH2509 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 12 |
Details | ACT_SITE: ACT_SITE => ECO:0000269|PubMed:15608653, ECO:0000269|PubMed:20096705 |
Chain | Residue | Details |
A | GLU581 | |
E | ARG647 | |
F | GLU581 | |
F | ARG647 | |
A | ARG647 | |
B | GLU581 | |
B | ARG647 | |
C | GLU581 | |
C | ARG647 | |
D | GLU581 | |
D | ARG647 | |
E | GLU581 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | ACT_SITE: ACT_SITE => ECO:0000269|PubMed:15608653 |
Chain | Residue | Details |
A | ARG596 | |
B | ARG596 | |
C | ARG596 | |
D | ARG596 | |
E | ARG596 | |
F | ARG596 |
site_id | SWS_FT_FI3 |
Number of Residues | 36 |
Details | SITE: Binding to sialic acid => ECO:0000269|PubMed:20096705 |
Chain | Residue | Details |
A | HIS542 | |
B | ASP578 | |
B | THR598 | |
B | ARG599 | |
C | HIS542 | |
C | ASP545 | |
C | ARG549 | |
C | ASP578 | |
C | THR598 | |
C | ARG599 | |
D | HIS542 | |
A | ASP545 | |
D | ASP545 | |
D | ARG549 | |
D | ASP578 | |
D | THR598 | |
D | ARG599 | |
E | HIS542 | |
E | ASP545 | |
E | ARG549 | |
E | ASP578 | |
E | THR598 | |
A | ARG549 | |
E | ARG599 | |
F | HIS542 | |
F | ASP545 | |
F | ARG549 | |
F | ASP578 | |
F | THR598 | |
F | ARG599 | |
A | ASP578 | |
A | THR598 | |
A | ARG599 | |
B | HIS542 | |
B | ASP545 | |
B | ARG549 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 15608653, 8089131 |
Chain | Residue | Details |
A | GLU581 | |
A | ARG596 | |
A | ARG647 |
site_id | CSA2 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 15608653, 8089131 |
Chain | Residue | Details |
B | GLU581 | |
B | ARG596 | |
B | ARG647 |
site_id | CSA3 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 15608653, 8089131 |
Chain | Residue | Details |
C | GLU581 | |
C | ARG596 | |
C | ARG647 |
site_id | CSA4 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 15608653, 8089131 |
Chain | Residue | Details |
D | GLU581 | |
D | ARG596 | |
D | ARG647 |
site_id | CSA5 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 15608653, 8089131 |
Chain | Residue | Details |
E | GLU581 | |
E | ARG596 | |
E | ARG647 |
site_id | CSA6 |
Number of Residues | 3 |
Details | a catalytic site defined by CSA, PubMed 15608653, 8089131 |
Chain | Residue | Details |
F | GLU581 | |
F | ARG596 | |
F | ARG647 |
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 829 |
Chain | Residue | Details |
A | TYR325 | promote heterolysis, proton acceptor, proton donor |
A | HIS350 | promote heterolysis, proton acceptor, proton donor, proton relay |
A | GLU581 | activator, electrostatic stabiliser, increase nucleophilicity, promote heterolysis, proton acceptor, proton donor |
A | ARG596 | electrostatic stabiliser, increase acidity |
A | ARG647 | electrostatic stabiliser, increase acidity |
site_id | MCSA2 |
Number of Residues | 5 |
Details | M-CSA 829 |
Chain | Residue | Details |
B | TYR325 | promote heterolysis, proton acceptor, proton donor |
B | HIS350 | promote heterolysis, proton acceptor, proton donor, proton relay |
B | GLU581 | activator, electrostatic stabiliser, increase nucleophilicity, promote heterolysis, proton acceptor, proton donor |
B | ARG596 | electrostatic stabiliser, increase acidity |
B | ARG647 | electrostatic stabiliser, increase acidity |
site_id | MCSA3 |
Number of Residues | 5 |
Details | M-CSA 829 |
Chain | Residue | Details |
C | TYR325 | promote heterolysis, proton acceptor, proton donor |
C | HIS350 | promote heterolysis, proton acceptor, proton donor, proton relay |
C | GLU581 | activator, electrostatic stabiliser, increase nucleophilicity, promote heterolysis, proton acceptor, proton donor |
C | ARG596 | electrostatic stabiliser, increase acidity |
C | ARG647 | electrostatic stabiliser, increase acidity |
site_id | MCSA4 |
Number of Residues | 5 |
Details | M-CSA 829 |
Chain | Residue | Details |
D | TYR325 | promote heterolysis, proton acceptor, proton donor |
D | HIS350 | promote heterolysis, proton acceptor, proton donor, proton relay |
D | GLU581 | activator, electrostatic stabiliser, increase nucleophilicity, promote heterolysis, proton acceptor, proton donor |
D | ARG596 | electrostatic stabiliser, increase acidity |
D | ARG647 | electrostatic stabiliser, increase acidity |
site_id | MCSA5 |
Number of Residues | 5 |
Details | M-CSA 829 |
Chain | Residue | Details |
E | TYR325 | promote heterolysis, proton acceptor, proton donor |
E | HIS350 | promote heterolysis, proton acceptor, proton donor, proton relay |
E | GLU581 | activator, electrostatic stabiliser, increase nucleophilicity, promote heterolysis, proton acceptor, proton donor |
E | ARG596 | electrostatic stabiliser, increase acidity |
E | ARG647 | electrostatic stabiliser, increase acidity |
site_id | MCSA6 |
Number of Residues | 5 |
Details | M-CSA 829 |
Chain | Residue | Details |
F | TYR325 | promote heterolysis, proton acceptor, proton donor |
F | HIS350 | promote heterolysis, proton acceptor, proton donor, proton relay |
F | GLU581 | activator, electrostatic stabiliser, increase nucleophilicity, promote heterolysis, proton acceptor, proton donor |
F | ARG596 | electrostatic stabiliser, increase acidity |
F | ARG647 | electrostatic stabiliser, increase acidity |