1UVK
The structural basis for RNA specificity and Ca2 inhibition of an RNA-dependent RNA polymerase phi6p2 dead-end complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0001172 | biological_process | RNA-templated transcription |
| A | 0003723 | molecular_function | RNA binding |
| A | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0019079 | biological_process | viral genome replication |
| A | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| A | 0039694 | biological_process | viral RNA genome replication |
| A | 0044423 | cellular_component | virion component |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0050265 | molecular_function | RNA uridylyltransferase activity |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0001172 | biological_process | RNA-templated transcription |
| C | 0003723 | molecular_function | RNA binding |
| C | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| C | 0006351 | biological_process | DNA-templated transcription |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016779 | molecular_function | nucleotidyltransferase activity |
| C | 0019079 | biological_process | viral genome replication |
| C | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| C | 0039694 | biological_process | viral RNA genome replication |
| C | 0044423 | cellular_component | virion component |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0050265 | molecular_function | RNA uridylyltransferase activity |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0001172 | biological_process | RNA-templated transcription |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| E | 0006351 | biological_process | DNA-templated transcription |
| E | 0016740 | molecular_function | transferase activity |
| E | 0016779 | molecular_function | nucleotidyltransferase activity |
| E | 0019079 | biological_process | viral genome replication |
| E | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| E | 0039694 | biological_process | viral RNA genome replication |
| E | 0044423 | cellular_component | virion component |
| E | 0046872 | molecular_function | metal ion binding |
| E | 0050265 | molecular_function | RNA uridylyltransferase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue MN A 701 |
| Chain | Residue |
| A | ASP454 |
| A | GLU491 |
| A | ALA495 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 702 |
| Chain | Residue |
| A | ASP324 |
| A | POP703 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue POP A 703 |
| Chain | Residue |
| A | G704 |
| A | LYS223 |
| A | ARG225 |
| A | ARG268 |
| A | MG702 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue G A 704 |
| Chain | Residue |
| A | ARG81 |
| A | GLN206 |
| A | ARG270 |
| A | POP703 |
| A | GTP706 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 705 |
| Chain | Residue |
| A | ASP624 |
| A | TYR630 |
| A | GTP706 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue POP C 701 |
| Chain | Residue |
| C | LYS223 |
| C | ARG225 |
| C | ARG268 |
| C | MG702 |
| C | G704 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue MG C 702 |
| Chain | Residue |
| C | ASP324 |
| C | POP701 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue MN C 703 |
| Chain | Residue |
| C | ASP454 |
| C | GLU491 |
| C | ALA495 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue G C 704 |
| Chain | Residue |
| C | ARG81 |
| C | GLN206 |
| C | ARG270 |
| C | POP701 |
| C | GTP706 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue MG C 705 |
| Chain | Residue |
| C | ASP624 |
| C | TYR630 |
| C | GTP706 |
| site_id | AD2 |
| Number of Residues | 5 |
| Details | binding site for residue POP E 701 |
| Chain | Residue |
| E | LYS223 |
| E | ARG225 |
| E | ARG268 |
| E | MG702 |
| E | G704 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue MG E 702 |
| Chain | Residue |
| E | ASP324 |
| E | POP701 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue MN E 703 |
| Chain | Residue |
| E | ASP454 |
| E | GLU491 |
| E | ALA495 |
| site_id | AD5 |
| Number of Residues | 5 |
| Details | binding site for residue G E 704 |
| Chain | Residue |
| E | ARG81 |
| E | GLN206 |
| E | ARG270 |
| E | POP701 |
| E | GTP706 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue MG E 705 |
| Chain | Residue |
| E | ASP624 |
| E | TYR630 |
| E | GTP706 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 525 |
| Details | Domain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 9 |
| Details | Binding site: {} |
| Chain | Residue | Details |
