1T6J
Crystal Structure of Phenylalanine Ammonia Lyase from Rhodosporidium toruloides
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006559 | biological_process | L-phenylalanine catabolic process |
| A | 0009698 | biological_process | phenylpropanoid metabolic process |
| A | 0009800 | biological_process | cinnamic acid biosynthetic process |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016841 | molecular_function | ammonia-lyase activity |
| A | 0045548 | molecular_function | phenylalanine ammonia-lyase activity |
| A | 0052883 | molecular_function | tyrosine ammonia-lyase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006559 | biological_process | L-phenylalanine catabolic process |
| B | 0009698 | biological_process | phenylpropanoid metabolic process |
| B | 0009800 | biological_process | cinnamic acid biosynthetic process |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016841 | molecular_function | ammonia-lyase activity |
| B | 0045548 | molecular_function | phenylalanine ammonia-lyase activity |
| B | 0052883 | molecular_function | tyrosine ammonia-lyase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CIN B 1001 |
| Chain | Residue |
| B | 175211 |
| B | LEU266 |
| B | ASN397 |
| B | LYS468 |
| B | GLU496 |
| B | GLN500 |
Functional Information from PROSITE/UniProt
| site_id | PS00488 |
| Number of Residues | 17 |
| Details | PAL_HISTIDASE Phenylalanine and histidine ammonia-lyases signature. GTISASGDLsPLSyiaA |
| Chain | Residue | Details |
| A | GLY207-ILE225 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | ACT_SITE: Proton donor/acceptor => ECO:0000250|UniProtKB:Q68G84 |
| Chain | Residue | Details |
| A | TYR110 | |
| B | TYR110 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:Q68G84 |
| Chain | Residue | Details |
| A | THR272 | |
| B | ALA501 | |
| A | ARG362 | |
| A | SER368 | |
| A | LEU399 | |
| A | ALA501 | |
| B | THR272 | |
| B | ARG362 | |
| B | SER368 | |
| B | LEU399 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:15350127, ECO:0007744|PDB:1T6J |
| Chain | Residue | Details |
| A | LEU470 | |
| A | ALA498 | |
| B | LEU470 | |
| B | ALA498 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | MOD_RES: 2,3-didehydroalanine (Ser) => ECO:0000269|PubMed:15350127 |
| Chain | Residue | Details |
| A | ASP214 | |
| B | ASP214 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | CROSSLNK: 5-imidazolinone (Ala-Gly) => ECO:0000269|PubMed:15350127 |
| Chain | Residue | Details |
| A | 175211 | |
| A | LEU215 | |
| B | 175211 | |
| B | LEU215 |
