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1T61

crystal structure of collagen IV NC1 domain from placenta basement membrane

Functional Information from GO Data
ChainGOidnamespacecontents
A0005201molecular_functionextracellular matrix structural constituent
A0005581cellular_componentcollagen trimer
B0005201molecular_functionextracellular matrix structural constituent
B0005581cellular_componentcollagen trimer
C0005201molecular_functionextracellular matrix structural constituent
C0005576cellular_componentextracellular region
C0005581cellular_componentcollagen trimer
C0005604cellular_componentbasement membrane
D0005201molecular_functionextracellular matrix structural constituent
D0005581cellular_componentcollagen trimer
E0005201molecular_functionextracellular matrix structural constituent
E0005581cellular_componentcollagen trimer
F0005201molecular_functionextracellular matrix structural constituent
F0005576cellular_componentextracellular region
F0005581cellular_componentcollagen trimer
F0005604cellular_componentbasement membrane
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K C 801
ChainResidue
ATYR189
CTYR63
CASN65
EALA186

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 802
ChainResidue
AALA186
DASN66
ETYR189

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K F 803
ChainResidue
FTYR63
FASN65
BALA186
DTYR189

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K C 805
ChainResidue
CTYR183
CALA184
EASN66
FTYR187

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K B 806
ChainResidue
BASN66
CTYR187
FALA184

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 807
ChainResidue
AASN66
BTYR189
DALA186

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL D 804
ChainResidue
AHOH875
DALA74
DARG76
DASP78
DGLY178
DHOH830

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL C 808
ChainResidue
CALA73
CSER74
CARG75
CASN76
CASP77
CHOH832
CHOH834

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL B 809
ChainResidue
BALA74
BARG76
BASP78
BGLY178
BARG179
BHOH829

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 810
ChainResidue
AALA74
AARG76
AASN77
AASP78
AHOH835
DHOH857

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL E 811
ChainResidue
CARG177
EALA74
EARG76
EASP78
EGLY178
EHOH841

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL F 812
ChainResidue
FALA73
FARG75
FASN76
FASP77
FHOH833
FHOH834

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA F 813
ChainResidue
BHOH883
CASP148
FASP148
FGLU149
FHOH908
FHOH914

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA C 814
ChainResidue
CASP148
CGLU149
CHOH923
EHOH890
FHOH914

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 811
ChainResidue
ATYR28
ACYS53
AARG55
BVAL120
BHIS121
BHOH889

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL E 812
ChainResidue
DTYR28
DARG55
EVAL120
EHIS121
EGLN123
EHOH887

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 810
ChainResidue
ALEU63
APHE73
BALA194
BTHR195
BHIS218

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 812
ChainResidue
AGLU87
APRO88
AMET89
ATYR184
AHOH831

site_idCC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 813
ChainResidue
AMET89
ATYR184
ATYR185
AALA186
AHOH916
CPRO66
DASN66

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 814
ChainResidue
AHIS121
AGLN123
AHOH887
CTRP27
CLEU53
CALA54
AVAL120

site_idCC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL D 805
ChainResidue
DVAL120
DHIS121
DHOH845
FTRP27
FALA54

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Met-Lys) (interchain with K-1651) => ECO:0000269|PubMed:19729652
ChainResidueDetails
AMET93
BMET93
DMET93
EMET93

site_idSWS_FT_FI2
Number of Residues8
DetailsCROSSLNK: S-Lysyl-methionine sulfilimine (Lys-Met) (interchain with M-1533) => ECO:0000269|PubMed:19729652
ChainResidueDetails
ALYS211
BLYS211
DLYS211
ELYS211

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PDB entries from 2024-07-17

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