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1SVU

Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions

Functional Information from GO Data
ChainGOidnamespacecontents
A0003886molecular_functionDNA (cytosine-5-)-methyltransferase activity
A0008168molecular_functionmethyltransferase activity
B0003886molecular_functionDNA (cytosine-5-)-methyltransferase activity
B0008168molecular_functionmethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 600
ChainResidue
AARG13
APRO70
AASP71
ALYS114
AARG172

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 601
ChainResidue
ATHR226
AARG228
ATYR242

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR RESIDUE SAH A 401
ChainResidue
AALA19
AGLY20
ALEU21
AGLY22
AGLY23
AASN39
AGLU40
ATRP41
AASP60
AILE61
ATHR62
AGLY78
ALEU100
ATYR285
AASN304
ASER305
APHE18

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE SAH B 402
ChainResidue
BPHE18
BALA19
BGLY20
BLEU21
BGLY23
BASN39
BGLU40
BTRP41
BGLY59
BASP60
BILE61
BLEU100
BSER305
BVAL306

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNX B 404
ChainResidue
BLYS43
BGLU47

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX B 405
ChainResidue
BVAL291

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX A 602
ChainResidue
AARG240

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX A 603
ChainResidue
ATYR254

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX B 406
ChainResidue
BASP60

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX B 407
ChainResidue
ALYS210

site_idBC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX A 604
ChainResidue
ALYS67

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX A 605
ChainResidue
AASN52

site_idBC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX B 410
ChainResidue
BGLU203

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNX B 411
ChainResidue
BPRO198

Functional Information from PROSITE/UniProt
site_idPS00094
Number of Residues13
DetailsC5_MTASE_1 C-5 cytosine-specific DNA methylases active site. DiLcaGfPCqAFS
ChainResidueDetails
AASP73-SER85

site_idPS00095
Number of Residues19
DetailsC5_MTASE_2 C-5 cytosine-specific DNA methylases C-terminal signature. KqfGNSVvInVlqyIaynI
ChainResidueDetails
ALYS300-ILE318

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PubMed","id":"7899082","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1mht
ChainResidueDetails
AGLU119

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1mht
ChainResidueDetails
BCYS81
BGLU119

site_idMCSA1
Number of Residues3
DetailsM-CSA 293
ChainResidueDetails
AGLU119attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond acceptor, increase electrophilicity
AARG163attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase electrophilicity
AARG165attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase electrophilicity

site_idMCSA2
Number of Residues4
DetailsM-CSA 293
ChainResidueDetails
BCYS81covalently attached, hydrogen bond acceptor, nucleofuge, nucleophile, polar interaction, proton acceptor, proton donor
BGLU119attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond acceptor, increase electrophilicity
BARG163attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase electrophilicity
BARG165attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase electrophilicity

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PDB entries from 2026-04-01

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