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1SSX

0.83A resolution crystal structure of alpha-lytic protease at pH 8

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE SO4 A 246
ChainResidue
AARG48
AHOH454
AHOH520
AHOH566
AHOH568
AHOH708
AARG120
AGLN237
ATYR238
AHOH313
AHOH314
AHOH422
AHOH423
AHOH424

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SO4 A 247
ChainResidue
AALA15
AASN15
AARG230
APRO233
AHOH349
AHOH398
AHOH437
AHOH438
AHOH506
AHOH513
AHOH513
AHOH679
AHOH702

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SO4 A 248
ChainResidue
AHIS57
AARG122
AARG192
AGLY193
ASER195
AGOL249
AHOH467
AHOH469
AHOH529
AHOH700
AHOH760
AHOH764
AHOH765

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE SO4 A 203
ChainResidue
AALA48
ATHR49
ASER110
AALA176
AARG178
AHOH311
AHOH367
AHOH368
AHOH569
AHOH654
AHOH745
AHOH754

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL A 249
ChainResidue
AHIS57
AARG122
ATYR171
AGLU174
AARG192
ASER214
AGLY215
ASO4248
AHOH355
AHOH468
AHOH570

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 250
ChainResidue
APHE120
AVAL120
ATHR120
AALA173
AGLU174
AHOH453
AHOH517
AHOH640
AHOH705
AHOH709

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VTAGHC
ChainResidueDetails
AVAL53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. CMgrGDSGGSWI
ChainResidueDetails
ACYS189-ILE200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system => ECO:0000250
ChainResidueDetails
AHIS57
AASP102
ASER195

Catalytic Information from CSA
site_idCSA1
Number of Residues6
Detailsa catalytic site defined by CSA, PubMed 15111063, 9808037
ChainResidueDetails
AASP102
ASER195
ASER195
AGLY193
AHIS57
ASER214

site_idMCSA1
Number of Residues5
DetailsM-CSA 609
ChainResidueDetails
AHIS57proton acceptor, proton donor
AASP102electrostatic stabiliser
AGLY193electrostatic stabiliser
ASER195electrostatic stabiliser
ASER214electrostatic stabiliser

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PDB entries from 2024-08-28

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