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1SL3

crystal structue of Thrombin in complex with a potent P1 heterocycle-Aryl based inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0005509molecular_functioncalcium ion binding
A0005576cellular_componentextracellular region
A0006508biological_processproteolysis
A0007596biological_processblood coagulation
Functional Information from PDB Data
site_idAC1
Number of Residues22
DetailsBINDING SITE FOR RESIDUE 170 A 1001
ChainResidue
AHIS57
ASER195
AVAL213
ASER214
ATRP215
AGLY216
AGLU217
AGLY219
ACYS220
AGLY226
APHE227
ATYR60
AHOH1099
AHOH1103
AHOH1129
ATRP60
AGLU97
AILE174
AASP189
AALA190
ACYS191
AGLU192

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR CHAIN B OF HIRUDIN
ChainResidue
APHE34
AGLN38
AGLU39
ALEU40
ALEU65
AARG73
ATHR74
AARG75
ATYR76
ALYS81
AILE82
AHOH1036
BHOH69
BHOH86
BHOH88
BHOH142
BALA365

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
ALEU53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
ChainResidueDetails
AASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Sulfotyrosine => ECO:0000250
ChainResidueDetails
BTYS363
AASP102
ASER195

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Cleavage; by factor Xa => ECO:0000269|PubMed:34265300
ChainResidueDetails
AARG15

site_idSWS_FT_FI3
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
ChainResidueDetails
AASN60

221051

PDB entries from 2024-06-12

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