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1S36

Crystal structure of a Ca2+-discharged photoprotein: Implications for the mechanisms of the calcium trigger and the bioluminescence

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0008218biological_processbioluminescence
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 401
ChainResidue
AASP30
AASN32
AASN34
ALYS36
ACL402

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 402
ChainResidue
AASN32
ALYS36
AGLU41
ANA401

site_idAC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE CEI A 201
ChainResidue
AHIS22
AMET25
APHE88
APHE92
AILE111
ATRP114
AGLY115
ATYR138
AMET171
AHIS175
ATRP179
AHOH403
AHOH404
AHOH405

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
APRO86
AASP90
ALYS93
ATRP103
AASN106
AHOH417
AHOH500

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DINGNGKITldEI
ChainResidueDetails
AASP30-ILE42
AASP123-TRP135
AASP159-MET171

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues15
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00448
ChainResidueDetails
AASP30
AGLU134
AASP159
AASP161
ASER163
AASP165
AGLU170
AASN32
AASN34
ALYS36
AGLU41
AASP123
AASP125
ASER127
ATHR129

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 768
ChainResidueDetails
AHIS22electrostatic stabiliser, proton acceptor
APHE92electrostatic stabiliser
ATYR138electrostatic stabiliser
AHIS175electrostatic stabiliser, proton acceptor
ATYR190electrostatic stabiliser, proton acceptor, proton donor, proton relay

218853

PDB entries from 2024-04-24

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