1RKT
Crystal structure of yfiR, a putative transcriptional regulator from Bacillus subtilis
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000976 | molecular_function | transcription cis-regulatory region binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0000976 | molecular_function | transcription cis-regulatory region binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE UNX B 401 |
| Chain | Residue |
| B | GLN110 |
| B | UNX402 |
| B | UNX403 |
| B | UNX408 |
| B | UNX409 |
| B | UNX412 |
| B | UNX414 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX B 402 |
| Chain | Residue |
| B | UNX408 |
| B | UNX409 |
| B | ILE172 |
| B | UNX401 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX B 403 |
| Chain | Residue |
| B | UNX401 |
| B | UNX408 |
| B | UNX412 |
| B | UNX414 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 404 |
| Chain | Residue |
| B | ILE64 |
| B | GLY67 |
| B | LEU68 |
| B | UNX413 |
| B | UNX414 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX B 405 |
| Chain | Residue |
| B | UNX406 |
| B | UNX410 |
| B | UNX411 |
| B | UNX436 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 406 |
| Chain | Residue |
| B | UNX405 |
| B | UNX407 |
| B | UNX410 |
| B | UNX411 |
| B | UNX436 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX B 407 |
| Chain | Residue |
| B | UNX406 |
| B | UNX410 |
| B | UNX411 |
| B | UNX436 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE UNX B 408 |
| Chain | Residue |
| B | UNX401 |
| B | UNX402 |
| B | UNX403 |
| B | UNX409 |
| B | UNX412 |
| B | UNX414 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 409 |
| Chain | Residue |
| B | PHE111 |
| B | UNX401 |
| B | UNX402 |
| B | UNX408 |
| B | UNX412 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 410 |
| Chain | Residue |
| B | UNX405 |
| B | UNX406 |
| B | UNX407 |
| B | UNX411 |
| B | UNX436 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 411 |
| Chain | Residue |
| B | UNX405 |
| B | UNX406 |
| B | UNX407 |
| B | UNX410 |
| B | UNX436 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE UNX B 412 |
| Chain | Residue |
| B | PHE111 |
| B | UNX401 |
| B | UNX403 |
| B | UNX408 |
| B | UNX409 |
| B | UNX414 |
| site_id | BC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX B 413 |
| Chain | Residue |
| B | ILE63 |
| B | GLN110 |
| B | UNX404 |
| B | UNX432 |
| site_id | BC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE UNX B 414 |
| Chain | Residue |
| B | GLN110 |
| B | UNX401 |
| B | UNX403 |
| B | UNX404 |
| B | UNX408 |
| B | UNX412 |
| site_id | BC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 415 |
| Chain | Residue |
| A | UNX416 |
| A | UNX417 |
| A | UNX418 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 416 |
| Chain | Residue |
| A | LEU165 |
| A | UNX415 |
| A | UNX417 |
| site_id | BC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 417 |
| Chain | Residue |
| A | LEU127 |
| A | UNX415 |
| A | UNX416 |
| site_id | BC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX A 418 |
| Chain | Residue |
| A | ASP169 |
| A | UNX415 |
| A | UNX419 |
| A | UNX420 |
| site_id | CC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX A 419 |
| Chain | Residue |
| A | UNX418 |
| A | UNX420 |
| A | UNX421 |
| A | UNX425 |
| site_id | CC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX A 420 |
| Chain | Residue |
| A | UNX418 |
| A | UNX419 |
| A | UNX421 |
| A | UNX425 |
| site_id | CC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 421 |
| Chain | Residue |
| A | UNX419 |
| A | UNX420 |
| A | UNX425 |
| site_id | CC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE UNX A 422 |
| Chain | Residue |
| B | UNX435 |
| A | UNX423 |
| A | UNX433 |
| A | HOH500 |
| B | GLN173 |
| B | UNX424 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 423 |
| Chain | Residue |
| A | UNX422 |
| B | UNX424 |
| B | UNX435 |
| site_id | CC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 424 |
| Chain | Residue |
| A | UNX422 |
| A | UNX423 |
| A | HOH500 |
| B | GLN173 |
| B | UNX435 |
| site_id | CC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX A 425 |
| Chain | Residue |
| A | GLN110 |
| A | UNX419 |
| A | UNX420 |
| A | UNX421 |
| site_id | CC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE UNX B 426 |
| Chain | Residue |
| B | GLY67 |
| B | UNX429 |
| site_id | CC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 427 |
| Chain | Residue |
| A | LEU68 |
| A | ARG130 |
| A | UNX431 |
| site_id | DC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE UNX A 428 |
| Chain | Residue |
| A | UNX430 |
| site_id | DC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE UNX B 429 |
| Chain | Residue |
| B | UNX426 |
| site_id | DC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE UNX A 430 |
| Chain | Residue |
| A | TYR91 |
| A | UNX428 |
| site_id | DC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX A 431 |
| Chain | Residue |
| A | LEU68 |
| A | ARG130 |
| A | UNX427 |
| site_id | DC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE UNX B 432 |
| Chain | Residue |
| B | GLN110 |
| B | UNX413 |
| site_id | DC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE UNX A 433 |
| Chain | Residue |
| A | GLN173 |
| A | UNX422 |
| A | HOH500 |
| B | GLN173 |
| site_id | DC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE UNX A 434 |
| Chain | Residue |
| A | GLN173 |
| site_id | DC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX B 435 |
| Chain | Residue |
| A | UNX422 |
| A | UNX423 |
| B | UNX424 |
| site_id | DC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE UNX B 436 |
| Chain | Residue |
| B | UNX405 |
| B | UNX406 |
| B | UNX407 |
| B | UNX410 |
| B | UNX411 |
| site_id | EC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE UNX B 437 |
| Chain | Residue |
| B | UNX438 |
| B | UNX439 |
| site_id | EC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE UNX B 438 |
| Chain | Residue |
| B | UNX437 |
| B | UNX439 |
| site_id | EC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE UNX B 439 |
| Chain | Residue |
| B | TYR91 |
| B | UNX437 |
| B | UNX438 |
