1R4P
Shiga toxin type 2
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005576 | cellular_component | extracellular region |
A | 0016787 | molecular_function | hydrolase activity |
A | 0017148 | biological_process | negative regulation of translation |
A | 0030598 | molecular_function | rRNA N-glycosylase activity |
A | 0090729 | molecular_function | toxin activity |
A | 0098676 | biological_process | modulation of host virulence by virus |
B | 0005576 | cellular_component | extracellular region |
B | 0019836 | biological_process | hemolysis by symbiont of host erythrocytes |
B | 0090729 | molecular_function | toxin activity |
B | 0098676 | biological_process | modulation of host virulence by virus |
C | 0005576 | cellular_component | extracellular region |
C | 0019836 | biological_process | hemolysis by symbiont of host erythrocytes |
C | 0090729 | molecular_function | toxin activity |
C | 0098676 | biological_process | modulation of host virulence by virus |
D | 0005576 | cellular_component | extracellular region |
D | 0019836 | biological_process | hemolysis by symbiont of host erythrocytes |
D | 0090729 | molecular_function | toxin activity |
D | 0098676 | biological_process | modulation of host virulence by virus |
E | 0005576 | cellular_component | extracellular region |
E | 0019836 | biological_process | hemolysis by symbiont of host erythrocytes |
E | 0090729 | molecular_function | toxin activity |
E | 0098676 | biological_process | modulation of host virulence by virus |
F | 0005576 | cellular_component | extracellular region |
F | 0019836 | biological_process | hemolysis by symbiont of host erythrocytes |
F | 0090729 | molecular_function | toxin activity |
F | 0098676 | biological_process | modulation of host virulence by virus |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 4001 |
Chain | Residue |
A | THR22 |
A | SER25 |
A | HOH4021 |
A | HOH4110 |
A | HOH4168 |
A | HOH4173 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 4002 |
Chain | Residue |
A | FMT3004 |
A | HOH4035 |
C | HOH3065 |
A | ARG266 |
A | SER278 |
A | ASN279 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA A 4003 |
Chain | Residue |
A | SER15 |
A | SER19 |
A | HOH4078 |
A | HOH4153 |
A | HOH4217 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA F 4004 |
Chain | Residue |
F | SER53 |
F | THR55 |
F | SER60 |
F | GLY61 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA B 4005 |
Chain | Residue |
B | SER53 |
B | THR55 |
B | SER60 |
B | GLY61 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE 1PS F 1001 |
Chain | Residue |
F | ASN14 |
F | ASP16 |
F | THR18 |
F | TRP29 |
F | HOH4018 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE 1PS B 1002 |
Chain | Residue |
B | ASN14 |
B | ASP16 |
B | THR18 |
B | TRP29 |
B | HOH4010 |
B | HOH4044 |
B | HOH4046 |
site_id | AC8 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE 1PS C 1003 |
Chain | Residue |
C | ASN14 |
C | GLU15 |
C | ASP16 |
C | THR18 |
C | TRP29 |
C | FMT3012 |
C | HOH3033 |
C | HOH3037 |
C | HOH3057 |
D | SER58 |
site_id | AC9 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE 1PS D 1004 |
Chain | Residue |
C | SER58 |
D | ASN14 |
D | GLU15 |
D | ASP16 |
D | THR18 |
D | TRP29 |
D | FMT3003 |
D | HOH3020 |
D | HOH3040 |
D | HOH3047 |
site_id | BC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE EDO F 2001 |
Chain | Residue |
A | SER229 |
A | PHE291 |
B | TYR13 |
F | SER31 |
F | ARG32 |
F | TRP33 |
F | ASN34 |
F | EDO2005 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO D 2002 |
Chain | Residue |
A | THR35 |
A | LYS288 |
A | GLY296 |
A | HOH4059 |
A | HOH4159 |
D | TRP33 |
site_id | BC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE EDO A 2003 |
Chain | Residue |
A | GLN33 |
A | GLY34 |
A | THR35 |
A | THR36 |
A | LYS288 |
A | LEU292 |
A | HOH4159 |
C | TRP33 |
C | ASN34 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 2004 |
Chain | Residue |
A | PHE3 |
A | THR4 |
A | SER16 |
A | SER19 |
A | ILE20 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO F 2005 |
Chain | Residue |
A | ARG176 |
A | HOH4235 |
F | SER31 |
F | TRP33 |
F | EDO2001 |
F | FMT3005 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE FMT A 3001 |
Chain | Residue |
A | GLN175 |
A | ARG176 |
A | ARG179 |
A | HOH4042 |
F | TRP33 |
site_id | BC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT E 3002 |
Chain | Residue |
E | ARG32 |
E | TRP33 |
E | ASN34 |
E | HOH3033 |
A | ARG179 |
A | THR294 |
A | HOH4105 |
site_id | BC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE FMT D 3003 |
Chain | Residue |
D | THR20 |
D | GLY59 |
D | 1PS1004 |
D | HOH3042 |
D | HOH3058 |
site_id | BC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE FMT A 3004 |
Chain | Residue |
A | ASN207 |
A | THR263 |
A | ASP265 |
A | ARG266 |
A | PRO267 |
A | NA4002 |
A | HOH4142 |
C | HOH3065 |
site_id | CC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FMT F 3005 |
Chain | Residue |
A | ASN227 |
A | SER229 |
A | ALA230 |
F | SER31 |
F | ARG32 |
F | EDO2005 |
site_id | CC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT B 3006 |
Chain | Residue |
B | ASN68 |
B | ASN69 |
B | HOH4026 |
B | HOH4053 |
C | ILE8 |
C | GLU9 |
C | GLN43 |
site_id | CC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FMT C 3007 |
Chain | Residue |
C | ARG32 |
C | TRP33 |
C | HOH3016 |
site_id | CC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE FMT E 3008 |
Chain | Residue |
A | HOH4090 |
E | THR30 |
E | SER31 |
E | ARG32 |
E | PHE62 |
site_id | CC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT A 3009 |
Chain | Residue |
A | ARG266 |
A | VAL268 |
A | HOH4106 |
A | HOH4161 |
site_id | CC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT A 3010 |
Chain | Residue |
A | THR110 |
A | VAL120 |
A | THR149 |
A | HOH4130 |
site_id | CC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT F 3011 |
Chain | Residue |
E | ASN68 |
E | ASN69 |
F | ILE8 |
F | GLU9 |
F | GLN43 |
F | HOH4033 |
F | HOH4041 |
site_id | CC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FMT C 3012 |
Chain | Residue |
C | THR20 |
C | GLY59 |
C | 1PS1003 |
C | HOH3034 |
C | HOH3060 |
C | HOH3063 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE FMT A 3013 |
Chain | Residue |
A | GLN129 |
A | ILE130 |
A | SER131 |
A | SER134 |
site_id | DC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT E 3014 |
Chain | Residue |
A | ARG219 |
A | ARG222 |
E | THR45 |
E | GLY46 |
E | MET47 |
E | ASN69 |
E | ASP70 |
site_id | DC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FMT A 3015 |
Chain | Residue |
A | TYR77 |
A | VAL78 |
A | SER112 |
A | VAL162 |
A | HOH4031 |
A | HOH4237 |
Functional Information from PROSITE/UniProt
site_id | PS00275 |
Number of Residues | 17 |
Details | SHIGA_RICIN Shiga/ricin ribosomal inactivating toxins active site signature. VtVTaEALRFRqIQreF |
Chain | Residue | Details |
A | VAL162-PHE178 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | ACT_SITE: ACT_SITE => ECO:0000250 |
Chain | Residue | Details |
A | GLU167 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | SITE: Cleavage; by furin => ECO:0000250 |
Chain | Residue | Details |
A | ARG250 |