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1PJ6

Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with folic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016491molecular_functionoxidoreductase activity
A0047866molecular_functiondimethylglycine oxidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 2001
ChainResidue
AASP257
AVAL412
AHOH2944
AHOH3153
AHOH3552

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE FOL A 2887
ChainResidue
APHE632
ALEU649
ATYR651
AGLU658
ATYR699
AHOH2971
AHOH2987
AHOH3177
AHOH3240
AHOH3265
AHOH3374
AHOH3674
AHOH3701
AHOH3929
ALEU508
ATYR539
ATHR554
ATYR631

site_idAC3
Number of Residues38
DetailsBINDING SITE FOR RESIDUE FAD A 902
ChainResidue
AGLY11
AGLY13
AILE14
AVAL15
AASP35
AGLN36
APRO42
AGLY44
ASER45
ATHR46
AHIS48
AALA49
APRO50
AGLY51
ALEU52
ATHR172
AVAL174
ACYS202
AALA203
AGLY204
ATRP206
AILE210
AHIS225
ATYR259
AGLY333
AILE334
AVAL360
ATRP361
AVAL362
ATHR363
AHOH2909
AHOH2911
AHOH2912
AHOH2915
AHOH2945
AHOH2992
AHOH3010
AHOH3143

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"For 5,10-methylenetetrahydrofolate synthesis activity","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues11
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12912903","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19369258","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"19369258","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsSite: {"description":"Important for catalytic activity","evidences":[{"source":"PubMed","id":"12912903","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsSite: {"description":"Important for catalytic activity","evidences":[{"source":"PubMed","id":"19369258","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12912903","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues1
DetailsModified residue: {"description":"Pros-8alpha-FAD histidine"}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pj5
ChainResidueDetails
ATYR259
AASP552
AHIS225

site_idMCSA1
Number of Residues3
DetailsM-CSA 879
ChainResidueDetails
AHIS225proton shuttle (general acid/base)
ATYR259proton shuttle (general acid/base)
AASP552proton shuttle (general acid/base)

246905

PDB entries from 2025-12-31

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