1PJ6
Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with folic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2002-05-01 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 70.877, 222.506, 119.304 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 * - 1.650 |
R-factor | 0.15752 |
Rwork | 0.156 |
R-free | 0.19300 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pj5 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.634 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.1.08) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 1.700 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.067 | 0.346 * |
Number of reflections | 106504 | |
<I/σ(I)> | 11.9 | |
Completeness [%] | 99.3 | 99 |
Redundancy | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 7.5 | 294 | 15% PEG 2000MME, 0.2 MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | reservoir | PEG5000 MME | 15 (%) | |
3 | 1 | reservoir | 0.2 (M) | pH7.5 | |
4 | 1 | reservoir | HEPES | 0.1 (M) |