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1PJ5

Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016491molecular_functionoxidoreductase activity
A0047866molecular_functiondimethylglycine oxidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 2001
ChainResidue
AASP257
AVAL412
AHOH2147
AHOH2152
AHOH2198
AHOH2237

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT A 2145
ChainResidue
ATRP361
ATYR415
AFAD902
AHOH2313
APHE54
AARG252
ATYR272

site_idAC3
Number of Residues41
DetailsBINDING SITE FOR RESIDUE FAD A 902
ChainResidue
AGLY11
AGLY13
AILE14
AVAL15
AASP35
AGLN36
APRO42
AGLY44
ASER45
ATHR46
AHIS48
AALA49
APRO50
AGLY51
ALEU52
ATHR172
ATHR173
AVAL174
ACYS202
AALA203
AGLY204
ATRP206
AILE210
AHIS225
ATYR259
AGLY333
AILE334
APHE335
AVAL360
ATRP361
AVAL362
ATHR363
AACT2145
AHOH2153
AHOH2157
AHOH2170
AHOH2194
AHOH2203
AHOH2291
AHOH2399
AHOH2404

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255
ChainResidueDetails
AHIS225
ATYR259

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: For 5,10-methylenetetrahydrofolate synthesis activity => ECO:0000255
ChainResidueDetails
AASP552

site_idSWS_FT_FI3
Number of Residues7
DetailsBINDING: BINDING => ECO:0000269|PubMed:12912903, ECO:0000269|PubMed:19369258
ChainResidueDetails
AILE14
AASP35
ASER45
ALEU52
AVAL174
ATYR259
AVAL360

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:19369258
ChainResidueDetails
ATYR539

site_idSWS_FT_FI5
Number of Residues3
DetailsBINDING:
ChainResidueDetails
ATHR554
AGLY566
AGLU658

site_idSWS_FT_FI6
Number of Residues2
DetailsSITE: Important for catalytic activity => ECO:0000269|PubMed:12912903
ChainResidueDetails
AHIS225
ATYR259

site_idSWS_FT_FI7
Number of Residues1
DetailsSITE: Important for catalytic activity => ECO:0000269|PubMed:19369258, ECO:0000305|PubMed:12912903
ChainResidueDetails
AASP552

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Pros-8alpha-FAD histidine
ChainResidueDetails
AHIS48

Catalytic Information from CSA
site_idCSA1
Number of Residues3
Detailsa catalytic site defined by CSA, PubMed 12912903
ChainResidueDetails
ATYR259
AASP552
AHIS225

site_idMCSA1
Number of Residues3
DetailsM-CSA 879
ChainResidueDetails
AHIS225proton shuttle (general acid/base)
ATYR259proton shuttle (general acid/base)
AASP552proton shuttle (general acid/base)

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PDB entries from 2024-09-18

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