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1OGV

Lipidic cubic phase crystal structure of the photosynthetic reaction centre from Rhodobacter sphaeroides

Functional Information from GO Data
ChainGOidnamespacecontents
H0015979biological_processphotosynthesis
H0016020cellular_componentmembrane
H0019684biological_processphotosynthesis, light reaction
H0030077cellular_componentplasma membrane light-harvesting complex
H0042314molecular_functionbacteriochlorophyll binding
H0042717cellular_componentplasma membrane-derived chromatophore membrane
H0045156molecular_functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
L0009772biological_processphotosynthetic electron transport in photosystem II
L0015979biological_processphotosynthesis
L0016020cellular_componentmembrane
L0019684biological_processphotosynthesis, light reaction
L0030077cellular_componentplasma membrane light-harvesting complex
L0042314molecular_functionbacteriochlorophyll binding
L0042717cellular_componentplasma membrane-derived chromatophore membrane
L0045156molecular_functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
L0046872molecular_functionmetal ion binding
M0009772biological_processphotosynthetic electron transport in photosystem II
M0015979biological_processphotosynthesis
M0016020cellular_componentmembrane
M0019684biological_processphotosynthesis, light reaction
M0030077cellular_componentplasma membrane light-harvesting complex
M0042314molecular_functionbacteriochlorophyll binding
M0042717cellular_componentplasma membrane-derived chromatophore membrane
M0045156molecular_functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
M0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FE2 M1307
ChainResidue
LHIS190
LHIS230
MHIS219
MGLU234
MHIS266

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL M1308
ChainResidue
MGLY56
MARG132

site_idAC3
Number of Residues19
DetailsBINDING SITE FOR RESIDUE BCL L1282
ChainResidue
LALA127
LLEU131
LVAL157
LTHR160
LTYR162
LASN166
LHIS168
LHIS173
LILE177
LPHE180
LSER244
LCYS247
LMET248
LBCL1283
LBPH1284
MBCL1302
MBCL1303
LPHE97
LALA124

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE BCL L1283
ChainResidue
LILE49
LTYR128
LPHE146
LILE150
LHIS153
LLEU154
LBCL1282
LBPH1284
MPHE197
MGLY203
MILE206
MALA207
MTYR210
MGLY211
MLEU214
MBCL1303
MHOH2023

site_idAC5
Number of Residues19
DetailsBINDING SITE FOR RESIDUE BPH L1284
ChainResidue
LGLY45
LPHE97
LTRP100
LGLU104
LILE117
LPHE121
LPHE123
LALA124
LTYR148
LGLY149
LHIS153
LVAL241
LBCL1282
LBCL1283
MTYR210
MALA213
MLEU214
MTRP252
MMET256

site_idAC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE BCL M1302
ChainResidue
LHIS168
LMET174
LILE177
LSER178
LTHR182
LLEU185
LBCL1282
LHOH2027
MTRP157
MILE179
MHIS182
MLEU183
MTHR186
MBCL1303
MBPH1304

site_idAC7
Number of Residues23
DetailsBINDING SITE FOR RESIDUE BCL M1303
ChainResidue
MBPH1304
LVAL157
LTYR162
LPHE181
LBCL1282
LBCL1283
MALA153
MLEU156
MLEU160
MTHR186
MASN187
MPHE189
MSER190
MLEU196
MPHE197
MHIS202
MSER205
MILE206
MTYR210
MVAL276
MGLY280
MILE284
MBCL1302

site_idAC8
Number of Residues18
DetailsBINDING SITE FOR RESIDUE BPH M1304
ChainResidue
LPHE181
LALA184
LLEU185
LLEU189
LLEU219
MSER59
MGLY63
MALA125
MTRP129
MTHR146
MALA149
MPHE150
MALA153
MALA273
MVAL274
MTHR277
MBCL1302
MBCL1303

site_idAC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE U10 M1305
ChainResidue
LTRP100
MHIS219
MTHR222
MALA248
MALA249
MTRP252
MMET256
MPHE258
MASN259
MALA260
MTHR261
MMET262
MILE265
MTRP268
MMET272

site_idBC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE CDL M1306
ChainResidue
HILE22
HPHE23
HLEU27
HTYR30
LASN199
LLYS202
MGLY143
MLYS144
MHIS145
MTRP148
MTRP155
MARG267
MTRP271
MHOH2017

Functional Information from PROSITE/UniProt
site_idPS00244
Number of Residues27
DetailsREACTION_CENTER Photosynthetic reaction center proteins signature. NlfynPfHglSiaflygsallfAmHGA
ChainResidueDetails
MASN195-ALA221
LASN166-ALA192

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues134
DetailsTRANSMEM: Helical
ChainResidueDetails
MGLY53-GLY79
MLYS110-ALA139
MMET142-LEU167
MPHE197-ALA225
MASN259-LEU285

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: axial binding residue
ChainResidueDetails
MHIS182
MHIS202
LHIS116-MET138
LPRO171-ALA198
LGLY225-ILE250

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING:
ChainResidueDetails
MHIS219
MGLU234
MTRP252
MHIS266

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: axial binding residue
ChainResidueDetails
LHIS153
LHIS173

site_idSWS_FT_FI5
Number of Residues3
DetailsBINDING:
ChainResidueDetails
LHIS190
LPHE216
LHIS230

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PDB entries from 2024-11-06

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