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1OFY

three dimensional structure of the reduced form of nine-heme cytochrome c at ph 7.5

Functional Information from GO Data
ChainGOidnamespacecontents
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A1302
ChainResidue
AARG122
AGLU124
AHOH2263
BLYS121
BSER232
BPRO233

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A1293
ChainResidue
APHE35
AHIS37
ACYS47
ACYS50
AHIS51
APRO56
ASER58
AHEC1295
AHOH2011
AHOH2049
AHOH2243
AHOH2244
AHOH2245
ASER8
AALA10
AILE14

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC A1294
ChainResidue
ACYS50
AHIS52
ATHR53
AVAL57
ACYS59
ATHR61
ACYS62
AHIS63
AGLU70
AGLY71
AASN72
AARG78
AALA79
AMET80
AARG88
APRO94
AVAL95
AHOH2246

site_idAC4
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC A1295
ChainResidue
AVAL33
APHE35
AASN36
AILE39
AHIS40
ALYS43
AVAL95
ASER96
ACYS97
ACYS100
AHIS101
AGLN104
ALYS212
ALEU213
AALA216
AHEC1293
AHEC1297
AHOH2247
AHOH2248
AHOH2249
AHOH2250

site_idAC5
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC A1296
ChainResidue
AGLU102
ATHR105
AARG108
AGLU110
ACYS111
ACYS114
AHIS115
AVAL118
APRO120
ALYS121
ATRP126
AASP211
APHE217
AHIS218
AILE223
ATHR227
AHOH2091
AHOH2105
AHOH2251
AHOH2252

site_idAC6
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC A1297
ChainResidue
BARG231
BPRO239
BSER243
AMET16
APHE17
APRO18
AALA29
AMET30
ALYS31
AVAL33
ALEU76
AMET80
AHIS81
ACYS97
ATRP126
ACYS127
ACYS130
AHIS131
AHEC1295
AHOH2253
AHOH2254

site_idAC7
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A1298
ChainResidue
AALA177
APRO178
APHE195
AHIS197
ALEU201
ALEU224
ACYS225
ACYS228
AHIS229
ALEU236
ALYS240
ACYS241
ATYR263
AHEC1300
AHOH2256
BLYS26

site_idAC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A1299
ChainResidue
ACYS228
AHIS230
AARG231
ALYS240
ACYS241
ACYS244
AHIS245
AGLY255
AARG256
APRO257
AALA262
ALEU265
AGLN266
AHOH2103
AHOH2257
BGOL1302

site_idAC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC A1300
ChainResidue
AILE183
ASER193
APHE195
AARG199
AHIS200
ASER203
ALEU204
AARG207
AGLN266
ACYS267
ACYS270
AHIS271
AMET274
AVAL276
AARG278
APRO279
AHEC1298
AHOH2258
AHOH2259
AHOH2260

site_idBC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC A1301
ChainResidue
AILE183
AASP184
AALA185
ALEU186
AALA187
AASP188
ALYS189
ATYR190
ATYR263
AHIS264
AMET268
AHIS271
AASP281
AASP283
ACYS284
ACYS287
AHIS288
AHOH2261
AHOH2262

site_idBC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEC B1293
ChainResidue
BSER8
BALA10
BILE14
BMET16
BPHE35
BHIS37
BILE44
BCYS47
BCYS50
BHIS51
BPRO56
BSER58
BHEC1295
BHOH2222
BHOH2223

site_idBC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC B1294
ChainResidue
BCYS50
BHIS52
BTHR53
BVAL57
BCYS59
BTHR61
BCYS62
BHIS63
BGLU70
BARG78
BALA79
BMET80
BARG88
BPRO94
BVAL95
BHOH2094

site_idBC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC B1295
ChainResidue
BVAL33
BPHE35
BASN36
BHIS40
BLYS43
BSER96
BCYS97
BCYS100
BHIS101
BGLN104
BLYS212
BLEU213
BALA216
BHEC1293
BHOH2225
BHOH2226
BHOH2227
BHOH2228

site_idBC5
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC B1296
ChainResidue
BGLU102
BTHR105
BARG108
BGLU110
BCYS111
BCYS114
BHIS115
BLYS121
BTRP126
BILE208
BASP211
BPHE217
BHIS218
BILE223
BTHR227
BHOH2118
BHOH2229
BHOH2230

site_idBC6
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEC B1297
ChainResidue
AARG231
APRO239
ASER243
AGOL1303
BMET16
BPHE17
BPRO18
BALA29
BMET30
BLYS31
BPRO32
BLEU76
BMET80
BHIS81
BCYS97
BTRP126
BCYS127
BCYS130
BHIS131
BGOL1302
BHOH2039
BHOH2042

site_idBC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC B1298
ChainResidue
ALYS26
AHOH2019
AHOH2020
BALA177
BPRO178
BHIS197
BLEU201
BLEU224
BCYS225
BCYS228
BHIS229
BLEU236
BLYS240
BCYS241
BTYR263
BHEC1300
BHOH2231
BHOH2232

site_idBC8
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEC B1299
ChainResidue
BCYS228
BHIS230
BARG231
BLYS240
BCYS241
BCYS244
BHIS245
BPRO257
BALA262
BLEU265
BGLN266
BHOH2233
BHOH2234
BHOH2235

site_idBC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC B1300
ChainResidue
BCYS114
BILE183
BSER193
BPHE195
BTHR196
BARG199
BHIS200
BSER203
BARG207
BCYS267
BCYS270
BHIS271
BMET274
BVAL276
BPRO279
BHEC1298
BHOH2236
BHOH2237
BHOH2238
BHOH2239

site_idCC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC B1301
ChainResidue
BILE183
BASP184
BALA185
BLEU186
BALA187
BASP188
BLYS189
BTYR190
BMET260
BTYR263
BHIS264
BCYS267
BMET268
BARG280
BCYS284
BCYS287
BHIS288
BHOH2240
BHOH2241

site_idCC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A1303
ChainResidue
ASER232
APRO233
AHOH2192
BARG122
BGLU124
BCYS127
BHEC1297
BHOH2117

site_idCC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B1302
ChainResidue
AARG256
AHEC1299
BASP77
BHIS81
BHEC1297
BHOH2091
BHOH2242

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsBINDING: axial binding residue
ChainResidueDetails
AHIS37
AHIS197
AHIS200
AHIS218
AHIS229
AHIS230
AHIS245
AHIS264
AHIS271
AHIS288
BHIS37
AHIS40
BHIS40
BHIS51
BHIS52
BHIS63
BHIS81
BHIS101
BHIS115
BHIS131
BHIS197
BHIS200
AHIS51
BHIS218
BHIS229
BHIS230
BHIS245
BHIS264
BHIS271
BHIS288
AHIS52
AHIS63
AHIS81
AHIS101
AHIS115
AHIS131

site_idSWS_FT_FI2
Number of Residues36
DetailsBINDING: covalent
ChainResidueDetails
ACYS47
ACYS130
ACYS225
ACYS228
ACYS241
ACYS244
ACYS267
ACYS270
ACYS284
ACYS287
BCYS47
ACYS50
BCYS50
BCYS59
BCYS62
BCYS97
BCYS100
BCYS111
BCYS114
BCYS127
BCYS130
BCYS225
ACYS59
BCYS228
BCYS241
BCYS244
BCYS267
BCYS270
BCYS284
BCYS287
ACYS62
ACYS97
ACYS100
ACYS111
ACYS114
ACYS127

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PDB entries from 2024-04-24

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