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1OFY

three dimensional structure of the reduced form of nine-heme cytochrome c at ph 7.5

Functional Information from GO Data
ChainGOidnamespacecontents
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0042597cellular_componentperiplasmic space
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0042597cellular_componentperiplasmic space
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 1302
ChainResidue
AARG122
AGLU124
AHOH2263
BLYS121
BSER232
BPRO233

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A 1293
ChainResidue
APHE35
AHIS37
ACYS47
ACYS50
AHIS51
APRO56
ASER58
AHEC1295
AHOH2011
AHOH2049
AHOH2243
AHOH2244
AHOH2245
ASER8
AALA10
AILE14

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC A 1294
ChainResidue
ACYS50
AHIS52
ATHR53
AVAL57
ACYS59
ATHR61
ACYS62
AHIS63
AGLU70
AGLY71
AASN72
AARG78
AALA79
AMET80
AARG88
APRO94
AVAL95
AHOH2246

site_idAC4
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC A 1295
ChainResidue
AVAL33
APHE35
AASN36
AILE39
AHIS40
ALYS43
AVAL95
ASER96
ACYS97
ACYS100
AHIS101
AGLN104
ALYS212
ALEU213
AALA216
AHEC1293
AHEC1297
AHOH2247
AHOH2248
AHOH2249
AHOH2250

site_idAC5
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC A 1296
ChainResidue
AGLU102
ATHR105
AARG108
AGLU110
ACYS111
ACYS114
AHIS115
AVAL118
APRO120
ALYS121
ATRP126
AASP211
APHE217
AHIS218
AILE223
ATHR227
AHOH2091
AHOH2105
AHOH2251
AHOH2252

site_idAC6
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEC A 1297
ChainResidue
BARG231
BPRO239
BSER243
AMET16
APHE17
APRO18
AALA29
AMET30
ALYS31
AVAL33
ALEU76
AMET80
AHIS81
ACYS97
ATRP126
ACYS127
ACYS130
AHIS131
AHEC1295
AHOH2253
AHOH2254

site_idAC7
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A 1298
ChainResidue
AALA177
APRO178
APHE195
AHIS197
ALEU201
ALEU224
ACYS225
ACYS228
AHIS229
ALEU236
ALYS240
ACYS241
ATYR263
AHEC1300
AHOH2256
BLYS26

site_idAC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A 1299
ChainResidue
ACYS228
AHIS230
AARG231
ALYS240
ACYS241
ACYS244
AHIS245
AGLY255
AARG256
APRO257
AALA262
ALEU265
AGLN266
AHOH2103
AHOH2257
BGOL1302

site_idAC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC A 1300
ChainResidue
AILE183
ASER193
APHE195
AARG199
AHIS200
ASER203
ALEU204
AARG207
AGLN266
ACYS267
ACYS270
AHIS271
AMET274
AVAL276
AARG278
APRO279
AHEC1298
AHOH2258
AHOH2259
AHOH2260

site_idBC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC A 1301
ChainResidue
AILE183
AASP184
AALA185
ALEU186
AALA187
AASP188
ALYS189
ATYR190
ATYR263
AHIS264
AMET268
AHIS271
AASP281
AASP283
ACYS284
ACYS287
AHIS288
AHOH2261
AHOH2262

site_idBC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEC B 1293
ChainResidue
BSER8
BALA10
BILE14
BMET16
BPHE35
BHIS37
BILE44
BCYS47
BCYS50
BHIS51
BPRO56
BSER58
BHEC1295
BHOH2222
BHOH2223

site_idBC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC B 1294
ChainResidue
BCYS50
BHIS52
BTHR53
BVAL57
BCYS59
BTHR61
BCYS62
BHIS63
BGLU70
BARG78
BALA79
BMET80
BARG88
BPRO94
BVAL95
BHOH2094

site_idBC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC B 1295
ChainResidue
BVAL33
BPHE35
BASN36
BHIS40
BLYS43
BSER96
BCYS97
BCYS100
BHIS101
BGLN104
BLYS212
BLEU213
BALA216
BHEC1293
BHOH2225
BHOH2226
BHOH2227
BHOH2228

site_idBC5
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC B 1296
ChainResidue
BGLU102
BTHR105
BARG108
BGLU110
BCYS111
BCYS114
BHIS115
BLYS121
BTRP126
BILE208
BASP211
BPHE217
BHIS218
BILE223
BTHR227
BHOH2118
BHOH2229
BHOH2230

site_idBC6
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEC B 1297
ChainResidue
AARG231
APRO239
ASER243
AGOL1303
BMET16
BPHE17
BPRO18
BALA29
BMET30
BLYS31
BPRO32
BLEU76
BMET80
BHIS81
BCYS97
BTRP126
BCYS127
BCYS130
BHIS131
BGOL1302
BHOH2039
BHOH2042

site_idBC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEC B 1298
ChainResidue
ALYS26
AHOH2019
AHOH2020
BALA177
BPRO178
BHIS197
BLEU201
BLEU224
BCYS225
BCYS228
BHIS229
BLEU236
BLYS240
BCYS241
BTYR263
BHEC1300
BHOH2231
BHOH2232

site_idBC8
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEC B 1299
ChainResidue
BCYS228
BHIS230
BARG231
BLYS240
BCYS241
BCYS244
BHIS245
BPRO257
BALA262
BLEU265
BGLN266
BHOH2233
BHOH2234
BHOH2235

site_idBC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC B 1300
ChainResidue
BCYS114
BILE183
BSER193
BPHE195
BTHR196
BARG199
BHIS200
BSER203
BARG207
BCYS267
BCYS270
BHIS271
BMET274
BVAL276
BPRO279
BHEC1298
BHOH2236
BHOH2237
BHOH2238
BHOH2239

site_idCC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC B 1301
ChainResidue
BILE183
BASP184
BALA185
BLEU186
BALA187
BASP188
BLYS189
BTYR190
BMET260
BTYR263
BHIS264
BCYS267
BMET268
BARG280
BCYS284
BCYS287
BHIS288
BHOH2240
BHOH2241

site_idCC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 1303
ChainResidue
ASER232
APRO233
AHOH2192
BARG122
BGLU124
BCYS127
BHEC1297
BHOH2117

site_idCC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 1302
ChainResidue
AARG256
AHEC1299
BASP77
BHIS81
BHEC1297
BHOH2091
BHOH2242

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsBinding site: {"description":"axial binding residue"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues36
DetailsBinding site: {"description":"covalent"}
ChainResidueDetails

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PDB entries from 2026-09-30

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