1NZC
The high resolution structures of RmlC from Streptococcus suis in complex with dTDP-D-xylose
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005829 | cellular_component | cytosol |
| A | 0008830 | molecular_function | dTDP-4-dehydrorhamnose 3,5-epimerase activity |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| A | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| B | 0005829 | cellular_component | cytosol |
| B | 0008830 | molecular_function | dTDP-4-dehydrorhamnose 3,5-epimerase activity |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| B | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| C | 0005829 | cellular_component | cytosol |
| C | 0008830 | molecular_function | dTDP-4-dehydrorhamnose 3,5-epimerase activity |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| C | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| D | 0005829 | cellular_component | cytosol |
| D | 0008830 | molecular_function | dTDP-4-dehydrorhamnose 3,5-epimerase activity |
| D | 0016853 | molecular_function | isomerase activity |
| D | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| D | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE NI C 9602 |
| Chain | Residue |
| B | GLU52 |
| B | NI9603 |
| B | HOH9620 |
| B | HOH9632 |
| C | GLU52 |
| C | HOH9772 |
| C | HOH9814 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE NI B 9603 |
| Chain | Residue |
| B | HOH9656 |
| C | GLY49 |
| C | NI9602 |
| C | HOH9642 |
| C | HOH9772 |
| B | HOH9620 |
| B | HOH9632 |
| site_id | AC3 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE TDX B 9001 |
| Chain | Residue |
| A | ARG33 |
| A | PHE36 |
| A | GLU38 |
| A | HOH9064 |
| B | GLN61 |
| B | ARG73 |
| B | GLU78 |
| B | ASN127 |
| B | TYR140 |
| B | TRP146 |
| B | HOH9623 |
| B | HOH9624 |
| B | HOH9628 |
| B | HOH9636 |
| B | HOH9769 |
| site_id | AC4 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE TDX A 9002 |
| Chain | Residue |
| A | GLN61 |
| A | ASN63 |
| A | ARG73 |
| A | HIS76 |
| A | GLU78 |
| A | LYS82 |
| A | ASN127 |
| A | TYR140 |
| A | TRP146 |
| A | HOH9008 |
| A | HOH9010 |
| A | HOH9026 |
| A | HOH9028 |
| A | HOH9036 |
| A | HOH9040 |
| A | HOH9046 |
| A | HOH9071 |
| A | HOH9072 |
| A | HOH9096 |
| B | ARG33 |
| B | PHE36 |
| B | GLU38 |
| site_id | AC5 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE TDX C 9003 |
| Chain | Residue |
| C | GLN61 |
| C | ARG73 |
| C | HIS76 |
| C | GLU78 |
| C | LYS82 |
| C | ASN127 |
| C | TYR140 |
| C | TRP146 |
| C | HOH9620 |
| C | HOH9626 |
| C | HOH9647 |
| C | HOH9650 |
| C | HOH9657 |
| C | HOH9676 |
| C | HOH9682 |
| C | HOH9687 |
| C | HOH9752 |
| C | HOH9777 |
| C | HOH9782 |
| D | ARG33 |
| D | PHE36 |
| D | GLU38 |
| site_id | AC6 |
| Number of Residues | 23 |
| Details | BINDING SITE FOR RESIDUE TDX D 9004 |
| Chain | Residue |
| C | HIS29 |
| C | ARG33 |
| C | PHE36 |
| C | GLU38 |
| D | GLN61 |
| D | ARG73 |
| D | HIS76 |
| D | GLU78 |
| D | LYS82 |
| D | ASN127 |
| D | TYR140 |
| D | TRP146 |
| D | HOH9009 |
| D | HOH9011 |
| D | HOH9021 |
| D | HOH9023 |
| D | HOH9035 |
| D | HOH9046 |
| D | HOH9053 |
| D | HOH9075 |
| D | HOH9079 |
| D | HOH9104 |
| D | HOH9168 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1dzr |
| Chain | Residue | Details |
| A | HIS76 | |
| A | ASP180 |
| site_id | CSA2 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1dzr |
| Chain | Residue | Details |
| B | HIS76 | |
| B | ASP180 |
| site_id | CSA3 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1dzr |
| Chain | Residue | Details |
| C | HIS76 | |
| C | ASP180 |
| site_id | CSA4 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1dzr |
| Chain | Residue | Details |
| D | HIS76 | |
| D | ASP180 |
