1NPD
X-RAY STRUCTURE OF SHIKIMATE DEHYDROGENASE COMPLEXED WITH NAD+ FROM E.COLI (YDIB) NORTHEAST STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NESG) TARGET ER24
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
A | 0005515 | molecular_function | protein binding |
A | 0008652 | biological_process | amino acid biosynthetic process |
A | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
A | 0009423 | biological_process | chorismate biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0019632 | biological_process | shikimate metabolic process |
A | 0030266 | molecular_function | quinate 3-dehydrogenase (NAD+) activity |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0052733 | molecular_function | quinate 3-dehydrogenase (NADP+) activity |
A | 0052734 | molecular_function | shikimate 3-dehydrogenase (NAD+) activity |
B | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
B | 0005515 | molecular_function | protein binding |
B | 0008652 | biological_process | amino acid biosynthetic process |
B | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
B | 0009423 | biological_process | chorismate biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0019632 | biological_process | shikimate metabolic process |
B | 0030266 | molecular_function | quinate 3-dehydrogenase (NAD+) activity |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0052733 | molecular_function | quinate 3-dehydrogenase (NADP+) activity |
B | 0052734 | molecular_function | shikimate 3-dehydrogenase (NAD+) activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE NAD A 300 |
Chain | Residue |
A | ASP107 |
A | PHE160 |
A | LEU184 |
A | GLY203 |
A | THR204 |
A | LYS205 |
A | VAL206 |
A | MSE208 |
A | CYS232 |
A | VAL233 |
A | TYR234 |
A | GLY131 |
A | ASN235 |
A | GLY255 |
A | MSE258 |
A | LEU259 |
A | HOH3013 |
A | HOH3320 |
A | HOH3321 |
A | ALA132 |
A | GLY133 |
A | GLY134 |
A | ALA135 |
A | ASN155 |
A | ARG156 |
A | ASP158 |
site_id | AC2 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE NAD B 300 |
Chain | Residue |
B | ASP107 |
B | ALA132 |
B | GLY133 |
B | GLY134 |
B | ALA135 |
B | ASN155 |
B | ARG156 |
B | ASP158 |
B | PHE160 |
B | GLY203 |
B | THR204 |
B | LYS205 |
B | VAL206 |
B | MSE208 |
B | CYS232 |
B | TYR234 |
B | GLY255 |
B | MSE258 |
B | LEU259 |
B | HOH3014 |
B | HOH3106 |
B | HOH3111 |
B | HOH3127 |
B | HOH3271 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01578 |
Chain | Residue | Details |
A | LYS71 | |
A | ASP107 | |
B | LYS71 | |
B | ASP107 |
site_id | SWS_FT_FI2 |
Number of Residues | 10 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01578, ECO:0000269|PubMed:12624088, ECO:0000269|PubMed:12637497, ECO:0000269|PubMed:16021622 |
Chain | Residue | Details |
A | ALA132 | |
B | GLY255 | |
A | ASN155 | |
A | LYS205 | |
A | CYS232 | |
A | GLY255 | |
B | ALA132 | |
B | ASN155 | |
B | LYS205 | |
B | CYS232 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1nvt |
Chain | Residue | Details |
A | ASP98 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1nvt |
Chain | Residue | Details |
B | ASP98 |