1NMY

Crystal structure of human thymidylate kinase with FLTMP and AppNHp

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004550	molecular_function	nucleoside diphosphate kinase activity
A	0004798	molecular_function	thymidylate kinase activity
A	0005524	molecular_function	ATP binding
A	0005634	cellular_component	nucleus
A	0005737	cellular_component	cytoplasm
A	0005739	cellular_component	mitochondrion
A	0005759	cellular_component	mitochondrial matrix
A	0005829	cellular_component	cytosol
A	0006227	biological_process	dUDP biosynthetic process
A	0006233	biological_process	dTDP biosynthetic process
A	0006235	biological_process	dTTP biosynthetic process
A	0009165	biological_process	nucleotide biosynthetic process
A	0016301	molecular_function	kinase activity
A	0043627	biological_process	response to estrogen
A	0045445	biological_process	myoblast differentiation
A	0046105	biological_process	thymidine biosynthetic process
A	0046686	biological_process	response to cadmium ion
A	0046940	biological_process	nucleoside monophosphate phosphorylation
A	0071363	biological_process	cellular response to growth factor stimulus

Functional Information from PDB Data

site_id	AC1
Number of Residues	21
Details	BINDING SITE FOR RESIDUE ADP A 302

Chain	Residue
A	GLY18
A	HOH506
A	HOH507
A	HOH508
A	HOH537
A	HOH566
A	HOH573
A	HOH583
A	HOH592
A	HOH607
A	HOH624
A	LYS19
A	HOH651
A	HOH674
A	SER20
A	THR21
A	ARG143
A	LYS182
A	ILE184
A	MG401
A	HOH504

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site_id	AC2
Number of Residues	28
Details	BINDING SITE FOR RESIDUE ANP A 303

Chain	Residue
A	ASP15
A	ARG16
A	GLY18
A	LYS19
A	SER20
A	THR21
A	ARG97
A	ARG143
A	LYS182
A	ILE184
A	MG401
A	HOH504
A	HOH505
A	HOH506
A	HOH512
A	HOH514
A	HOH537
A	HOH566
A	HOH573
A	HOH583
A	HOH592
A	HOH607
A	HOH624
A	HOH651
A	HOH674
A	HOH682
A	HOH751
A	HOH755

---

site_id	AC3
Number of Residues	22
Details	BINDING SITE FOR RESIDUE FDM A 301

Chain	Residue
A	PHE42
A	PRO43
A	ARG45
A	PHE72
A	ARG76
A	ARG97
A	GLY102
A	PHE105
A	TYR151
A	HOH504
A	HOH505
A	HOH507
A	HOH512
A	HOH528
A	HOH542
A	HOH553
A	HOH555
A	HOH636
A	HOH682
A	HOH751
A	HOH761
A	HOH762

---

site_id	AC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG A 401

Chain	Residue
A	SER20
A	ADP302
A	ANP303
A	HOH504
A	HOH505
A	HOH506
A	HOH507

---

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 402

Chain	Residue
A	HOH501
A	HOH502
A	HOH503

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Functional Information from PROSITE/UniProt

site_id	PS01331
Number of Residues	13
Details	THYMIDYLATE_KINASE Thymidylate kinase signature. VVDRYafSGvAFT

Chain	Residue	Details
A	VAL94-THR106

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	BINDING: BINDING => ECO:0000269|PubMed:12614151, ECO:0007744|PDB:1NMX, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NN0, ECO:0007744|PDB:1NN3

Chain	Residue	Details
A	ARG16

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	BINDING: BINDING => ECO:0000269|PubMed:12614151, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NMZ, ECO:0007744|PDB:1NN1

Chain	Residue	Details
A	ARG97

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	BINDING: BINDING => ECO:0007744|PDB:1NMX, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NN0, ECO:0007744|PDB:1NN3

Chain	Residue	Details
A	LYS182

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	BINDING: BINDING => ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NMZ, ECO:0007744|PDB:1NN1, ECO:0007744|PDB:1NN5

Chain	Residue	Details
A	ARG192

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site_id	SWS_FT_FI5
Number of Residues	1
Details	MOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861

Chain	Residue	Details
A	LYS169

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