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1NMY

Crystal structure of human thymidylate kinase with FLTMP and AppNHp

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)0.9076
Spacegroup nameP 43 21 2
Unit cell lengths101.258, 101.258, 49.781
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.800 - 1.600
Rwork0.175
R-free0.22000
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.010

*

RMSD bond angle1.500

*

Data reduction softwareXDS
Data scaling softwareXDS
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.8001.700
High resolution limit [Å]1.6001.600
Rmerge0.0500.264

*

Total number of observations169968

*

Number of reflections34069
<I/σ(I)>16.64.8
Completeness [%]98.198.9
Redundancy54.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829315-20% PEG 3350, 100 mM Tris/HCl, pH 8.0, 5% filtered dead sea water, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein2 (mM)
21dropAppNHp2 (mM)

222926

PDB entries from 2024-07-24

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