Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NKG

Rhamnogalacturonan lyase from Aspergillus aculeatus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000272biological_processpolysaccharide catabolic process
A0003824molecular_functioncatalytic activity
A0005576cellular_componentextracellular region
A0005975biological_processcarbohydrate metabolic process
A0016829molecular_functionlyase activity
A0016837molecular_functioncarbon-oxygen lyase activity, acting on polysaccharides
A0030246molecular_functioncarbohydrate binding
A0045490biological_processpectin catabolic process
A0071555biological_processcell wall organization
A0102210molecular_functionrhamnogalacturonan endolyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 800
ChainResidue
AGLU347
AASP349
AGLN351
AASP502
AHOH1011

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 A 901
ChainResidue
AGLY232
AHOH1122
AHOH1123
AHOH1134
AHOH1137
AHOH1217
AHOH1388
AASN19
ASER229
AARG230
ASER231

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 902
ChainResidue
ALYS395
ALYS395
ASER490
ASER490
AHOH956
AHOH1029

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 903
ChainResidue
AARG429
AGLY488
AHOH1183

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 904
ChainResidue
AGLN47
ASER53
AARG107
AARG111
AHOH1172
AHOH1541
AHOH1572

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN331

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon