1N9S

Crystal structure of yeast SmF in spacegroup P43212

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000245	biological_process	spliceosomal complex assembly
A	0000387	biological_process	spliceosomal snRNP assembly
A	0000395	biological_process	mRNA 5'-splice site recognition
A	0000398	biological_process	mRNA splicing, via spliceosome
A	0003723	molecular_function	RNA binding
A	0005515	molecular_function	protein binding
A	0005634	cellular_component	nucleus
A	0005681	cellular_component	spliceosomal complex
A	0005682	cellular_component	U5 snRNP
A	0005685	cellular_component	U1 snRNP
A	0005686	cellular_component	U2 snRNP
A	0005737	cellular_component	cytoplasm
A	0006397	biological_process	mRNA processing
A	0008266	molecular_function	poly(U) RNA binding
A	0008380	biological_process	RNA splicing
A	0034715	cellular_component	pICln-Sm protein complex
A	0036261	biological_process	7-methylguanosine cap hypermethylation
A	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
A	0071013	cellular_component	catalytic step 2 spliceosome
A	0120114	cellular_component	Sm-like protein family complex
A	1903241	biological_process	U2-type prespliceosome assembly
A	1990904	cellular_component	ribonucleoprotein complex
A	1990935	molecular_function	splicing factor binding
B	0000245	biological_process	spliceosomal complex assembly
B	0000387	biological_process	spliceosomal snRNP assembly
B	0000395	biological_process	mRNA 5'-splice site recognition
B	0000398	biological_process	mRNA splicing, via spliceosome
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0005634	cellular_component	nucleus
B	0005681	cellular_component	spliceosomal complex
B	0005682	cellular_component	U5 snRNP
B	0005685	cellular_component	U1 snRNP
B	0005686	cellular_component	U2 snRNP
B	0005737	cellular_component	cytoplasm
B	0006397	biological_process	mRNA processing
B	0008266	molecular_function	poly(U) RNA binding
B	0008380	biological_process	RNA splicing
B	0034715	cellular_component	pICln-Sm protein complex
B	0036261	biological_process	7-methylguanosine cap hypermethylation
B	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
B	0071013	cellular_component	catalytic step 2 spliceosome
B	0120114	cellular_component	Sm-like protein family complex
B	1903241	biological_process	U2-type prespliceosome assembly
B	1990904	cellular_component	ribonucleoprotein complex
B	1990935	molecular_function	splicing factor binding
C	0000245	biological_process	spliceosomal complex assembly
C	0000387	biological_process	spliceosomal snRNP assembly
C	0000395	biological_process	mRNA 5'-splice site recognition
C	0000398	biological_process	mRNA splicing, via spliceosome
C	0003723	molecular_function	RNA binding
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005681	cellular_component	spliceosomal complex
C	0005682	cellular_component	U5 snRNP
C	0005685	cellular_component	U1 snRNP
C	0005686	cellular_component	U2 snRNP
C	0005737	cellular_component	cytoplasm
C	0006397	biological_process	mRNA processing
C	0008266	molecular_function	poly(U) RNA binding
C	0008380	biological_process	RNA splicing
C	0034715	cellular_component	pICln-Sm protein complex
C	0036261	biological_process	7-methylguanosine cap hypermethylation
C	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
C	0071013	cellular_component	catalytic step 2 spliceosome
C	0120114	cellular_component	Sm-like protein family complex
C	1903241	biological_process	U2-type prespliceosome assembly
C	1990904	cellular_component	ribonucleoprotein complex
C	1990935	molecular_function	splicing factor binding
D	0000245	biological_process	spliceosomal complex assembly
D	0000387	biological_process	spliceosomal snRNP assembly
D	0000395	biological_process	mRNA 5'-splice site recognition
D	0000398	biological_process	mRNA splicing, via spliceosome
D	0003723	molecular_function	RNA binding
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005681	cellular_component	spliceosomal complex
D	0005682	cellular_component	U5 snRNP
D	0005685	cellular_component	U1 snRNP
D	0005686	cellular_component	U2 snRNP
D	0005737	cellular_component	cytoplasm
D	0006397	biological_process	mRNA processing
D	0008266	molecular_function	poly(U) RNA binding
D	0008380	biological_process	RNA splicing
D	0034715	cellular_component	pICln-Sm protein complex
D	0036261	biological_process	7-methylguanosine cap hypermethylation
D	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
D	0071013	cellular_component	catalytic step 2 spliceosome
D	0120114	cellular_component	Sm-like protein family complex
D	1903241	biological_process	U2-type prespliceosome assembly
D	1990904	cellular_component	ribonucleoprotein complex
D	1990935	molecular_function	splicing factor binding
E	0000245	biological_process	spliceosomal complex assembly
E	0000387	biological_process	spliceosomal snRNP assembly
E	0000395	biological_process	mRNA 5'-splice site recognition
E	0000398	biological_process	mRNA splicing, via spliceosome
E	0003723	molecular_function	RNA binding
E	0005515	molecular_function	protein binding
E	0005634	cellular_component	nucleus
E	0005681	cellular_component	spliceosomal complex
E	0005682	cellular_component	U5 snRNP
E	0005685	cellular_component	U1 snRNP
E	0005686	cellular_component	U2 snRNP
E	0005737	cellular_component	cytoplasm
E	0006397	biological_process	mRNA processing
E	0008266	molecular_function	poly(U) RNA binding
E	0008380	biological_process	RNA splicing
E	0034715	cellular_component	pICln-Sm protein complex
E	0036261	biological_process	7-methylguanosine cap hypermethylation
E	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
E	0071013	cellular_component	catalytic step 2 spliceosome
E	0120114	cellular_component	Sm-like protein family complex
E	1903241	biological_process	U2-type prespliceosome assembly
E	1990904	cellular_component	ribonucleoprotein complex
E	1990935	molecular_function	splicing factor binding
F	0000245	biological_process	spliceosomal complex assembly
F	0000387	biological_process	spliceosomal snRNP assembly
F	0000395	biological_process	mRNA 5'-splice site recognition
F	0000398	biological_process	mRNA splicing, via spliceosome
F	0003723	molecular_function	RNA binding
F	0005515	molecular_function	protein binding
F	0005634	cellular_component	nucleus
F	0005681	cellular_component	spliceosomal complex
F	0005682	cellular_component	U5 snRNP
F	0005685	cellular_component	U1 snRNP
F	0005686	cellular_component	U2 snRNP
F	0005737	cellular_component	cytoplasm
F	0006397	biological_process	mRNA processing
F	0008266	molecular_function	poly(U) RNA binding
F	0008380	biological_process	RNA splicing
F	0034715	cellular_component	pICln-Sm protein complex
F	0036261	biological_process	7-methylguanosine cap hypermethylation
F	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
F	0071013	cellular_component	catalytic step 2 spliceosome
F	0120114	cellular_component	Sm-like protein family complex
F	1903241	biological_process	U2-type prespliceosome assembly
F	1990904	cellular_component	ribonucleoprotein complex
F	1990935	molecular_function	splicing factor binding
G	0000245	biological_process	spliceosomal complex assembly
G	0000387	biological_process	spliceosomal snRNP assembly
G	0000395	biological_process	mRNA 5'-splice site recognition
G	0000398	biological_process	mRNA splicing, via spliceosome
G	0003723	molecular_function	RNA binding
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005681	cellular_component	spliceosomal complex
G	0005682	cellular_component	U5 snRNP
G	0005685	cellular_component	U1 snRNP
G	0005686	cellular_component	U2 snRNP
G	0005737	cellular_component	cytoplasm
G	0006397	biological_process	mRNA processing
G	0008266	molecular_function	poly(U) RNA binding
G	0008380	biological_process	RNA splicing
G	0034715	cellular_component	pICln-Sm protein complex
G	0036261	biological_process	7-methylguanosine cap hypermethylation
G	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
G	0071013	cellular_component	catalytic step 2 spliceosome
G	0120114	cellular_component	Sm-like protein family complex
G	1903241	biological_process	U2-type prespliceosome assembly
G	1990904	cellular_component	ribonucleoprotein complex
G	1990935	molecular_function	splicing factor binding
H	0000245	biological_process	spliceosomal complex assembly
H	0000387	biological_process	spliceosomal snRNP assembly
H	0000395	biological_process	mRNA 5'-splice site recognition
H	0000398	biological_process	mRNA splicing, via spliceosome
H	0003723	molecular_function	RNA binding
H	0005515	molecular_function	protein binding
H	0005634	cellular_component	nucleus
H	0005681	cellular_component	spliceosomal complex
H	0005682	cellular_component	U5 snRNP
H	0005685	cellular_component	U1 snRNP
H	0005686	cellular_component	U2 snRNP
H	0005737	cellular_component	cytoplasm
H	0006397	biological_process	mRNA processing
H	0008266	molecular_function	poly(U) RNA binding
H	0008380	biological_process	RNA splicing
H	0034715	cellular_component	pICln-Sm protein complex
H	0036261	biological_process	7-methylguanosine cap hypermethylation
H	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
H	0071013	cellular_component	catalytic step 2 spliceosome
H	0120114	cellular_component	Sm-like protein family complex
H	1903241	biological_process	U2-type prespliceosome assembly
H	1990904	cellular_component	ribonucleoprotein complex
H	1990935	molecular_function	splicing factor binding
I	0000245	biological_process	spliceosomal complex assembly
I	0000387	biological_process	spliceosomal snRNP assembly
I	0000395	biological_process	mRNA 5'-splice site recognition
I	0000398	biological_process	mRNA splicing, via spliceosome
I	0003723	molecular_function	RNA binding
I	0005515	molecular_function	protein binding
I	0005634	cellular_component	nucleus
I	0005681	cellular_component	spliceosomal complex
I	0005682	cellular_component	U5 snRNP
I	0005685	cellular_component	U1 snRNP
I	0005686	cellular_component	U2 snRNP
I	0005737	cellular_component	cytoplasm
I	0006397	biological_process	mRNA processing
I	0008266	molecular_function	poly(U) RNA binding
I	0008380	biological_process	RNA splicing
I	0034715	cellular_component	pICln-Sm protein complex
I	0036261	biological_process	7-methylguanosine cap hypermethylation
I	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
I	0071013	cellular_component	catalytic step 2 spliceosome
I	0120114	cellular_component	Sm-like protein family complex
I	1903241	biological_process	U2-type prespliceosome assembly
I	1990904	cellular_component	ribonucleoprotein complex
I	1990935	molecular_function	splicing factor binding
J	0000245	biological_process	spliceosomal complex assembly
J	0000387	biological_process	spliceosomal snRNP assembly
J	0000395	biological_process	mRNA 5'-splice site recognition
J	0000398	biological_process	mRNA splicing, via spliceosome
J	0003723	molecular_function	RNA binding
J	0005515	molecular_function	protein binding
J	0005634	cellular_component	nucleus
J	0005681	cellular_component	spliceosomal complex
J	0005682	cellular_component	U5 snRNP
J	0005685	cellular_component	U1 snRNP
J	0005686	cellular_component	U2 snRNP
J	0005737	cellular_component	cytoplasm
J	0006397	biological_process	mRNA processing
J	0008266	molecular_function	poly(U) RNA binding
J	0008380	biological_process	RNA splicing
J	0034715	cellular_component	pICln-Sm protein complex
J	0036261	biological_process	7-methylguanosine cap hypermethylation
J	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
J	0071013	cellular_component	catalytic step 2 spliceosome
J	0120114	cellular_component	Sm-like protein family complex
J	1903241	biological_process	U2-type prespliceosome assembly
J	1990904	cellular_component	ribonucleoprotein complex
J	1990935	molecular_function	splicing factor binding
K	0000245	biological_process	spliceosomal complex assembly
K	0000387	biological_process	spliceosomal snRNP assembly
K	0000395	biological_process	mRNA 5'-splice site recognition
K	0000398	biological_process	mRNA splicing, via spliceosome
K	0003723	molecular_function	RNA binding
K	0005515	molecular_function	protein binding
K	0005634	cellular_component	nucleus
K	0005681	cellular_component	spliceosomal complex
K	0005682	cellular_component	U5 snRNP
K	0005685	cellular_component	U1 snRNP
K	0005686	cellular_component	U2 snRNP
K	0005737	cellular_component	cytoplasm
K	0006397	biological_process	mRNA processing
K	0008266	molecular_function	poly(U) RNA binding
K	0008380	biological_process	RNA splicing
K	0034715	cellular_component	pICln-Sm protein complex
K	0036261	biological_process	7-methylguanosine cap hypermethylation
K	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
K	0071013	cellular_component	catalytic step 2 spliceosome
K	0120114	cellular_component	Sm-like protein family complex
K	1903241	biological_process	U2-type prespliceosome assembly
K	1990904	cellular_component	ribonucleoprotein complex
K	1990935	molecular_function	splicing factor binding
L	0000245	biological_process	spliceosomal complex assembly
L	0000387	biological_process	spliceosomal snRNP assembly
L	0000395	biological_process	mRNA 5'-splice site recognition
L	0000398	biological_process	mRNA splicing, via spliceosome
L	0003723	molecular_function	RNA binding
L	0005515	molecular_function	protein binding
L	0005634	cellular_component	nucleus
L	0005681	cellular_component	spliceosomal complex
L	0005682	cellular_component	U5 snRNP
L	0005685	cellular_component	U1 snRNP
L	0005686	cellular_component	U2 snRNP
L	0005737	cellular_component	cytoplasm
L	0006397	biological_process	mRNA processing
L	0008266	molecular_function	poly(U) RNA binding
L	0008380	biological_process	RNA splicing
L	0034715	cellular_component	pICln-Sm protein complex
L	0036261	biological_process	7-methylguanosine cap hypermethylation
L	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
L	0071013	cellular_component	catalytic step 2 spliceosome
L	0120114	cellular_component	Sm-like protein family complex
L	1903241	biological_process	U2-type prespliceosome assembly
L	1990904	cellular_component	ribonucleoprotein complex
L	1990935	molecular_function	splicing factor binding
M	0000245	biological_process	spliceosomal complex assembly
M	0000387	biological_process	spliceosomal snRNP assembly
M	0000395	biological_process	mRNA 5'-splice site recognition
M	0000398	biological_process	mRNA splicing, via spliceosome
M	0003723	molecular_function	RNA binding
M	0005515	molecular_function	protein binding
M	0005634	cellular_component	nucleus
M	0005681	cellular_component	spliceosomal complex
M	0005682	cellular_component	U5 snRNP
M	0005685	cellular_component	U1 snRNP
M	0005686	cellular_component	U2 snRNP
M	0005737	cellular_component	cytoplasm
M	0006397	biological_process	mRNA processing
M	0008266	molecular_function	poly(U) RNA binding
M	0008380	biological_process	RNA splicing
M	0034715	cellular_component	pICln-Sm protein complex
M	0036261	biological_process	7-methylguanosine cap hypermethylation
M	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
M	0071013	cellular_component	catalytic step 2 spliceosome
M	0120114	cellular_component	Sm-like protein family complex
M	1903241	biological_process	U2-type prespliceosome assembly
M	1990904	cellular_component	ribonucleoprotein complex
M	1990935	molecular_function	splicing factor binding
N	0000245	biological_process	spliceosomal complex assembly
N	0000387	biological_process	spliceosomal snRNP assembly
N	0000395	biological_process	mRNA 5'-splice site recognition
N	0000398	biological_process	mRNA splicing, via spliceosome
N	0003723	molecular_function	RNA binding
N	0005515	molecular_function	protein binding
N	0005634	cellular_component	nucleus
N	0005681	cellular_component	spliceosomal complex
N	0005682	cellular_component	U5 snRNP
N	0005685	cellular_component	U1 snRNP
N	0005686	cellular_component	U2 snRNP
N	0005737	cellular_component	cytoplasm
N	0006397	biological_process	mRNA processing
N	0008266	molecular_function	poly(U) RNA binding
N	0008380	biological_process	RNA splicing
N	0034715	cellular_component	pICln-Sm protein complex
N	0036261	biological_process	7-methylguanosine cap hypermethylation
N	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
N	0071013	cellular_component	catalytic step 2 spliceosome
N	0120114	cellular_component	Sm-like protein family complex
N	1903241	biological_process	U2-type prespliceosome assembly
N	1990904	cellular_component	ribonucleoprotein complex
N	1990935	molecular_function	splicing factor binding

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	144
Details	Domain: {"description":"Sm","evidences":[{"source":"PROSITE-ProRule","id":"PRU01346","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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