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1MR3

Saccharomyces cerevisiae ADP-ribosylation Factor 2 (ScArf2) complexed with GDP-3'P at 1.6A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
F0003924molecular_functionGTPase activity
F0005515molecular_functionprotein binding
F0005525molecular_functionGTP binding
F0005794cellular_componentGolgi apparatus
F0005829cellular_componentcytosol
F0005886cellular_componentplasma membrane
F0006886biological_processintracellular protein transport
F0015031biological_processprotein transport
F0016192biological_processvesicle-mediated transport
F0016236biological_processmacroautophagy
F0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 801
ChainResidue
FTHR31
FG3D800
FHOH2078
FHOH2079
FHOH2080
FHOH2085

site_idAC2
Number of Residues26
DetailsBINDING SITE FOR RESIDUE G3D F 800
ChainResidue
FGLY29
FLYS30
FTHR31
FTHR32
FASN126
FLYS127
FASP129
FCYS159
FALA160
FTHR161
FMG801
FHOH2079
FHOH2085
FHOH2090
FHOH2091
FHOH2119
FHOH2139
FHOH2186
FHOH2189
FHOH2191
FHOH2193
FHOH2202
FHOH2233
FASP26
FGLY27
FALA28

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EDO F 2065
ChainResidue
FTHR48
FILE49
FGLY50
FPHE51
FSER135
FPDO2009
FEOH2047
FEDO2072
FHOH2098
FHOH2144

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO F 2067
ChainResidue
FPRO152
FTRP153
FHOH2128

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO F 2069
ChainResidue
FLYS16
FASP93
FASN95
FLEU130
FHOH2110
FHOH2187
FHOH2209

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO F 2071
ChainResidue
FASN112
FASP114

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE EDO F 2072
ChainResidue
FTHR48
FARG75
FTRP78
FSER135
FPDO2009
FEOH2047
FEDO2065
FHOH2112
FHOH2222

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO F 2073
ChainResidue
FTHR32
FLYS36
FTHR161
FHOH2089
FHOH2106
FHOH2189
FHOH2199

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO F 2074
ChainResidue
FTHR48
FARG97
FGLU138
FHOH2185
FHOH2222
FHOH2260

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO F 2075
ChainResidue
FILE20
FLEU21
FTHR64
FTYR81
FASN84
FTHR85
FHOH2195
FHOH2284

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO F 2076
ChainResidue
FLYS36
FLYS38
FEDO2077

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO F 2077
ChainResidue
FSER162
FGLY163
FGLU164
FEDO2076

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL F 950
ChainResidue
FARG83
FGLU115
FARG117
FASN118
FHOH2162

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL F 954
ChainResidue
FASP67
FPDO2008
FPDO2009
FGLY50
FASN52
FTRP66

site_idBC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EOH F 2046
ChainResidue
FLEU25
FASP93
FASP96
FARG99
FILE100
FALA103
FHOH2094

site_idBC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE EOH F 2047
ChainResidue
FTHR48
FPHE51
FARG75
FTRP78
FSER135
FEDO2065
FEDO2072
FHOH2112
FHOH2222

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EOH F 2048
ChainResidue
FGLN71
FGLN156
FGLU168
FHOH2188

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EOH F 2049
ChainResidue
FARG73
FHOH2190

site_idCC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PDO F 2008
ChainResidue
FASN52
FGLU54
FVAL65
FTRP66
FASP67
FGOL954
FHOH2078
FHOH2080

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PDO F 2009
ChainResidue
FASP72
FARG73
FTRP78
FGOL954
FEDO2065
FEDO2072
FHOH2178

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING:
ChainResidueDetails
FASP26
FLYS127
FTHR161

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
FILE49
FGLN71

site_idSWS_FT_FI3
Number of Residues1
DetailsLIPID: N-myristoyl glycine => ECO:0000250
ChainResidueDetails
FLEU3

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P11076
ChainResidueDetails
FGLN128

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
FGLN71

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PDB entries from 2024-10-16

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