1LL0
Crystal Structure of Rabbit Muscle Glycogenin
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005978 | biological_process | glycogen biosynthetic process |
| A | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016757 | molecular_function | glycosyltransferase activity |
| A | 0030145 | molecular_function | manganese ion binding |
| A | 0042803 | molecular_function | protein homodimerization activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005978 | biological_process | glycogen biosynthetic process |
| B | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016757 | molecular_function | glycosyltransferase activity |
| B | 0030145 | molecular_function | manganese ion binding |
| B | 0042803 | molecular_function | protein homodimerization activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005978 | biological_process | glycogen biosynthetic process |
| C | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016757 | molecular_function | glycosyltransferase activity |
| C | 0030145 | molecular_function | manganese ion binding |
| C | 0042803 | molecular_function | protein homodimerization activity |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005978 | biological_process | glycogen biosynthetic process |
| D | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| D | 0016740 | molecular_function | transferase activity |
| D | 0016757 | molecular_function | glycosyltransferase activity |
| D | 0030145 | molecular_function | manganese ion binding |
| D | 0042803 | molecular_function | protein homodimerization activity |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0005634 | cellular_component | nucleus |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005978 | biological_process | glycogen biosynthetic process |
| E | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| E | 0016740 | molecular_function | transferase activity |
| E | 0016757 | molecular_function | glycosyltransferase activity |
| E | 0030145 | molecular_function | manganese ion binding |
| E | 0042803 | molecular_function | protein homodimerization activity |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005978 | biological_process | glycogen biosynthetic process |
| F | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| F | 0016740 | molecular_function | transferase activity |
| F | 0016757 | molecular_function | glycosyltransferase activity |
| F | 0030145 | molecular_function | manganese ion binding |
| F | 0042803 | molecular_function | protein homodimerization activity |
| F | 0046872 | molecular_function | metal ion binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0005978 | biological_process | glycogen biosynthetic process |
| G | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| G | 0016740 | molecular_function | transferase activity |
| G | 0016757 | molecular_function | glycosyltransferase activity |
| G | 0030145 | molecular_function | manganese ion binding |
| G | 0042803 | molecular_function | protein homodimerization activity |
| G | 0046872 | molecular_function | metal ion binding |
| H | 0005634 | cellular_component | nucleus |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005978 | biological_process | glycogen biosynthetic process |
| H | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| H | 0016740 | molecular_function | transferase activity |
| H | 0016757 | molecular_function | glycosyltransferase activity |
| H | 0030145 | molecular_function | manganese ion binding |
| H | 0042803 | molecular_function | protein homodimerization activity |
| H | 0046872 | molecular_function | metal ion binding |
| I | 0005634 | cellular_component | nucleus |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0005978 | biological_process | glycogen biosynthetic process |
| I | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| I | 0016740 | molecular_function | transferase activity |
| I | 0016757 | molecular_function | glycosyltransferase activity |
| I | 0030145 | molecular_function | manganese ion binding |
| I | 0042803 | molecular_function | protein homodimerization activity |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0005634 | cellular_component | nucleus |
| J | 0005737 | cellular_component | cytoplasm |
| J | 0005978 | biological_process | glycogen biosynthetic process |
| J | 0008466 | molecular_function | glycogenin glucosyltransferase activity |
| J | 0016740 | molecular_function | transferase activity |
| J | 0016757 | molecular_function | glycosyltransferase activity |
| J | 0030145 | molecular_function | manganese ion binding |
| J | 0042803 | molecular_function | protein homodimerization activity |
| J | 0046872 | molecular_function | metal ion binding |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 90 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:12051921, ECO:0000269|PubMed:15849187, ECO:0000269|PubMed:22226635, ECO:0007744|PDB:1LL2, ECO:0007744|PDB:1ZDF, ECO:0007744|PDB:1ZDG, ECO:0007744|PDB:3V91 |
| Chain | Residue | Details |
| A | THR9 | |
| B | THR9 | |
| B | ASN11 | |
| B | ALA15 | |
| B | ALA102 | |
| B | ASP103 | |
| B | THR104 | |
| B | SER133 | |
| B | GLY164 | |
| B | PRO218 | |
| C | THR9 | |
| A | ASN11 | |
| C | ASN11 | |
| C | ALA15 | |
| C | ALA102 | |
| C | ASP103 | |
| C | THR104 | |
| C | SER133 | |
| C | GLY164 | |
| C | PRO218 | |
| D | THR9 | |
| D | ASN11 | |
| A | ALA15 | |
| D | ALA15 | |
| D | ALA102 | |
| D | ASP103 | |
| D | THR104 | |
| D | SER133 | |
| D | GLY164 | |
| D | PRO218 | |
| E | THR9 | |
| E | ASN11 | |
| E | ALA15 | |
| A | ALA102 | |
| E | ALA102 | |
| E | ASP103 | |
| E | THR104 | |
| E | SER133 | |
| E | GLY164 | |
| E | PRO218 | |
| F | THR9 | |
| F | ASN11 | |
| F | ALA15 | |
| F | ALA102 | |
| A | ASP103 | |
| F | ASP103 | |
| F | THR104 | |
| F | SER133 | |
| F | GLY164 | |
| F | PRO218 | |
| G | THR9 | |
| G | ASN11 | |
| G | ALA15 | |
| G | ALA102 | |
| G | ASP103 | |
| A | THR104 | |
| G | THR104 | |
| G | SER133 | |
| G | GLY164 | |
| G | PRO218 | |
| H | THR9 | |
| H | ASN11 | |
| H | ALA15 | |
| H | ALA102 | |
| H | ASP103 | |
| H | THR104 | |
| A | SER133 | |
| H | SER133 | |
| H | GLY164 | |
| H | PRO218 | |
| I | THR9 | |
| I | ASN11 | |
| I | ALA15 | |
| I | ALA102 | |
| I | ASP103 | |
| I | THR104 | |
| I | SER133 | |
| A | GLY164 | |
| I | GLY164 | |
| I | PRO218 | |
| J | THR9 | |
| J | ASN11 | |
| J | ALA15 | |
| J | ALA102 | |
| J | ASP103 | |
| J | THR104 | |
| J | SER133 | |
| J | GLY164 | |
| A | PRO218 | |
| J | PRO218 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:12051921, ECO:0000269|PubMed:15849187, ECO:0007744|PDB:1LL2, ECO:0007744|PDB:1ZDG |
| Chain | Residue | Details |
| A | ASP12 | |
| J | ASP12 | |
| B | ASP12 | |
| C | ASP12 | |
| D | ASP12 | |
| E | ASP12 | |
| F | ASP12 | |
| G | ASP12 | |
| H | ASP12 | |
| I | ASP12 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 40 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:P46976 |
| Chain | Residue | Details |
| A | PRO77 | |
| C | LEU86 | |
| C | GLY160 | |
| C | GLN163 | |
| D | PRO77 | |
| D | LEU86 | |
| D | GLY160 | |
| D | GLN163 | |
| E | PRO77 | |
| E | LEU86 | |
| E | GLY160 | |
| A | LEU86 | |
| E | GLN163 | |
| F | PRO77 | |
| F | LEU86 | |
| F | GLY160 | |
| F | GLN163 | |
| G | PRO77 | |
| G | LEU86 | |
| G | GLY160 | |
| G | GLN163 | |
| H | PRO77 | |
| A | GLY160 | |
| H | LEU86 | |
| H | GLY160 | |
| H | GLN163 | |
| I | PRO77 | |
| I | LEU86 | |
| I | GLY160 | |
| I | GLN163 | |
| J | PRO77 | |
| J | LEU86 | |
| J | GLY160 | |
| A | GLN163 | |
| J | GLN163 | |
| B | PRO77 | |
| B | LEU86 | |
| B | GLY160 | |
| B | GLN163 | |
| C | PRO77 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:22226635, ECO:0007744|PDB:3V91 |
| Chain | Residue | Details |
| A | GLY134 | |
| J | GLY134 | |
| B | GLY134 | |
| C | GLY134 | |
| D | GLY134 | |
| E | GLY134 | |
| F | GLY134 | |
| G | GLY134 | |
| H | GLY134 | |
| I | GLY134 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:15849187, ECO:0007744|PDB:1ZCT |
| Chain | Residue | Details |
| A | PHE212 | |
| J | PHE212 | |
| B | PHE212 | |
| C | PHE212 | |
| D | PHE212 | |
| E | PHE212 | |
| F | PHE212 | |
| G | PHE212 | |
| H | PHE212 | |
| I | PHE212 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:12051921, ECO:0000269|PubMed:22226635, ECO:0007744|PDB:1LL2, ECO:0007744|PDB:3V91 |
| Chain | Residue | Details |
| A | GLN215 | |
| J | GLN215 | |
| B | GLN215 | |
| C | GLN215 | |
| D | GLN215 | |
| E | GLN215 | |
| F | GLN215 | |
| G | GLN215 | |
| H | GLN215 | |
| I | GLN215 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 10 |
| Details | SITE: Important for catalytic activity => ECO:0000269|PubMed:10049511 |
| Chain | Residue | Details |
| A | LEU86 | |
| J | LEU86 | |
| B | LEU86 | |
| C | LEU86 | |
| D | LEU86 | |
| E | LEU86 | |
| F | LEU86 | |
| G | LEU86 | |
| H | LEU86 | |
| I | LEU86 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 10 |
| Details | MOD_RES: N-acetylthreonine => ECO:0000250|UniProtKB:P46976 |
| Chain | Residue | Details |
| A | ASP2 | |
| J | ASP2 | |
| B | ASP2 | |
| C | ASP2 | |
| D | ASP2 | |
| E | ASP2 | |
| F | ASP2 | |
| G | ASP2 | |
| H | ASP2 | |
| I | ASP2 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 10 |
| Details | MOD_RES: Phosphoserine; by PKA; in vitro => ECO:0000269|PubMed:3151442 |
| Chain | Residue | Details |
| A | ASP44 | |
| J | ASP44 | |
| B | ASP44 | |
| C | ASP44 | |
| D | ASP44 | |
| E | ASP44 | |
| F | ASP44 | |
| G | ASP44 | |
| H | ASP44 | |
| I | ASP44 |
| site_id | SWS_FT_FI10 |
| Number of Residues | 10 |
| Details | CARBOHYD: O-linked (Glc...) tyrosine => ECO:0000269|PubMed:8143846 |
| Chain | Residue | Details |
| A | SER195 | |
| J | SER195 | |
| B | SER195 | |
| C | SER195 | |
| D | SER195 | |
| E | SER195 | |
| F | SER195 | |
| G | SER195 | |
| H | SER195 | |
| I | SER195 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| A | ASP124 | |
| A | GLN163 | |
| A | ASN132 |
| site_id | CSA10 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| J | ASP124 | |
| J | GLN163 | |
| J | ASN132 |
| site_id | CSA2 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| B | ASP124 | |
| B | GLN163 | |
| B | ASN132 |
| site_id | CSA3 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| C | ASP124 | |
| C | GLN163 | |
| C | ASN132 |
| site_id | CSA4 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| D | ASP124 | |
| D | GLN163 | |
| D | ASN132 |
| site_id | CSA5 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| E | ASP124 | |
| E | GLN163 | |
| E | ASN132 |
| site_id | CSA6 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| F | ASP124 | |
| F | GLN163 | |
| F | ASN132 |
| site_id | CSA7 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| G | ASP124 | |
| G | GLN163 | |
| G | ASN132 |
| site_id | CSA8 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| H | ASP124 | |
| H | GLN163 | |
| H | ASN132 |
| site_id | CSA9 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1ga8 |
| Chain | Residue | Details |
| I | ASP124 | |
| I | GLN163 | |
| I | ASN132 |
