1KZU
INTEGRAL MEMBRANE PERIPHERAL LIGHT HARVESTING COMPLEX FROM RHODOPSEUDOMONAS ACIDOPHILA STRAIN 10050
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0016020 | cellular_component | membrane |
| A | 0019684 | biological_process | photosynthesis, light reaction |
| A | 0019866 | cellular_component | organelle inner membrane |
| A | 0030076 | cellular_component | light-harvesting complex |
| A | 0030077 | cellular_component | plasma membrane light-harvesting complex |
| A | 0042314 | molecular_function | bacteriochlorophyll binding |
| A | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0016020 | cellular_component | membrane |
| B | 0019684 | biological_process | photosynthesis, light reaction |
| B | 0030076 | cellular_component | light-harvesting complex |
| B | 0030077 | cellular_component | plasma membrane light-harvesting complex |
| B | 0042314 | molecular_function | bacteriochlorophyll binding |
| B | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| B | 0046872 | molecular_function | metal ion binding |
| D | 0005886 | cellular_component | plasma membrane |
| D | 0016020 | cellular_component | membrane |
| D | 0019684 | biological_process | photosynthesis, light reaction |
| D | 0019866 | cellular_component | organelle inner membrane |
| D | 0030076 | cellular_component | light-harvesting complex |
| D | 0030077 | cellular_component | plasma membrane light-harvesting complex |
| D | 0042314 | molecular_function | bacteriochlorophyll binding |
| D | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0005886 | cellular_component | plasma membrane |
| E | 0016020 | cellular_component | membrane |
| E | 0019684 | biological_process | photosynthesis, light reaction |
| E | 0030076 | cellular_component | light-harvesting complex |
| E | 0030077 | cellular_component | plasma membrane light-harvesting complex |
| E | 0042314 | molecular_function | bacteriochlorophyll binding |
| E | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| E | 0046872 | molecular_function | metal ion binding |
| G | 0005886 | cellular_component | plasma membrane |
| G | 0016020 | cellular_component | membrane |
| G | 0019684 | biological_process | photosynthesis, light reaction |
| G | 0019866 | cellular_component | organelle inner membrane |
| G | 0030076 | cellular_component | light-harvesting complex |
| G | 0030077 | cellular_component | plasma membrane light-harvesting complex |
| G | 0042314 | molecular_function | bacteriochlorophyll binding |
| G | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| G | 0046872 | molecular_function | metal ion binding |
| H | 0005886 | cellular_component | plasma membrane |
| H | 0016020 | cellular_component | membrane |
| H | 0019684 | biological_process | photosynthesis, light reaction |
| H | 0030076 | cellular_component | light-harvesting complex |
| H | 0030077 | cellular_component | plasma membrane light-harvesting complex |
| H | 0042314 | molecular_function | bacteriochlorophyll binding |
| H | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
| H | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE RG1 B 42 |
| Chain | Residue |
| A | VAL23 |
| A | ILE26 |
| A | BCL56 |
| B | LEU3 |
| B | GLN7 |
| B | LEU11 |
| B | TYR14 |
| B | GLY18 |
| B | THR19 |
| B | BCL43 |
| D | TRP45 |
| D | BCL55 |
| G | GLN3 |
| G | THR8 |
| G | BCL56 |
| H | BCL43 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE RG1 A 54 |
| Chain | Residue |
| A | TYR44 |
| A | BCL55 |
| B | ALA29 |
| B | LEU32 |
| B | ALA36 |
| H | BCL43 |
| site_id | AC3 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE RG1 E 42 |
| Chain | Residue |
| A | GLN3 |
| A | THR8 |
| A | BCL56 |
| B | BCL43 |
| D | VAL23 |
| D | ILE26 |
| D | BCL56 |
| E | LEU3 |
| E | GLN7 |
| E | LEU11 |
| E | TYR14 |
| E | GLY18 |
| E | THR19 |
| E | BCL43 |
| G | TRP45 |
| G | BCL55 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE RG1 D 54 |
| Chain | Residue |
| B | BCL43 |
| D | TYR44 |
| D | BCL55 |
| E | ALA29 |
| E | LEU32 |
| E | ALA36 |
| site_id | AC5 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE RG1 H 42 |
| Chain | Residue |
| A | TRP45 |
| A | BCL55 |
| D | GLN3 |
| D | THR8 |
| D | BCL56 |
| E | BCL43 |
| G | VAL23 |
| G | ILE26 |
| G | BCL56 |
| H | LEU3 |
| H | GLN7 |
| H | LEU11 |
| H | TYR14 |
| H | GLY18 |
| H | THR19 |
| H | BCL43 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE RG1 G 54 |
| Chain | Residue |
| E | BCL43 |
| G | TYR44 |
| G | BCL55 |
| H | ALA29 |
| H | LEU32 |
| H | ALA36 |
| site_id | AC7 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE BCL A 55 |
| Chain | Residue |
| A | THR24 |
| A | ALA27 |
| A | HIS31 |
| A | TRP45 |
| A | RG154 |
| B | PHE22 |
| B | LEU25 |
| B | ALA26 |
| B | ALA29 |
| B | HIS30 |
| B | BCL43 |
| G | VAL10 |
| G | BCL56 |
| H | RG142 |
| H | BCL43 |
| site_id | AC8 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE BCL B 43 |
| Chain | Residue |
| A | VAL23 |
| A | ALA27 |
| A | VAL30 |
| A | HIS31 |
| A | ILE34 |
| A | BCL55 |
| A | BCL56 |
| B | THR19 |
| B | PHE22 |
| B | ALA26 |
| B | HIS30 |
| B | TRP39 |
| B | RG142 |
| D | TYR44 |
| D | TRP45 |
| D | RG154 |
| D | BCL55 |
| E | PHE22 |
| E | RG142 |
| site_id | AC9 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE BCL A 56 |
| Chain | Residue |
| A | FME1 |
| A | ASN2 |
| A | HOH57 |
| B | ILE16 |
| B | THR19 |
| B | ARG20 |
| B | HIS30 |
| B | TRP39 |
| B | RG142 |
| B | BCL43 |
| D | BCL55 |
| E | GLY18 |
| E | RG142 |
| site_id | BB |
| Number of Residues | 2 |
| Details | B800 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| A | FME1 |
| B | ARG20 |
| site_id | BBA |
| Number of Residues | 2 |
| Details | B850 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| A | HIS31 |
| A | TRP45 |
| site_id | BBB |
| Number of Residues | 2 |
| Details | B850 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| B | HIS30 |
| A | TYR44 |
| site_id | BC1 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE BCL D 55 |
| Chain | Residue |
| A | VAL10 |
| A | BCL56 |
| B | RG142 |
| B | BCL43 |
| D | THR24 |
| D | ALA27 |
| D | HIS31 |
| D | TRP45 |
| D | RG154 |
| E | PHE22 |
| E | LEU25 |
| E | ALA26 |
| E | ALA29 |
| E | HIS30 |
| E | BCL43 |
| site_id | BC2 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE BCL E 43 |
| Chain | Residue |
| D | VAL23 |
| D | ALA27 |
| D | VAL30 |
| D | HIS31 |
| D | ILE34 |
| D | BCL55 |
| D | BCL56 |
| E | THR19 |
| E | PHE22 |
| E | ALA26 |
| E | HIS30 |
| E | TRP39 |
| E | RG142 |
| G | TYR44 |
| G | TRP45 |
| G | RG154 |
| G | BCL55 |
| H | PHE22 |
| H | RG142 |
| site_id | BC3 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE BCL D 56 |
| Chain | Residue |
| D | FME1 |
| D | ASN2 |
| D | HOH57 |
| E | ILE16 |
| E | THR19 |
| E | ARG20 |
| E | HIS30 |
| E | TRP39 |
| E | RG142 |
| E | BCL43 |
| G | BCL55 |
| H | GLY18 |
| H | RG142 |
| site_id | BC4 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE BCL G 55 |
| Chain | Residue |
| D | VAL10 |
| D | BCL56 |
| E | RG142 |
| E | BCL43 |
| G | THR24 |
| G | ALA27 |
| G | HIS31 |
| G | TRP45 |
| G | RG154 |
| H | PHE22 |
| H | LEU25 |
| H | ALA26 |
| H | ALA29 |
| H | HIS30 |
| H | BCL43 |
| site_id | BC5 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE BCL H 43 |
| Chain | Residue |
| A | TYR44 |
| A | TRP45 |
| A | RG154 |
| A | BCL55 |
| B | PHE22 |
| B | RG142 |
| G | VAL23 |
| G | ALA27 |
| G | VAL30 |
| G | HIS31 |
| G | ILE34 |
| G | BCL55 |
| G | BCL56 |
| H | THR19 |
| H | PHE22 |
| H | ALA26 |
| H | HIS30 |
| H | TRP39 |
| H | RG142 |
| site_id | BC6 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE BCL G 56 |
| Chain | Residue |
| A | BCL55 |
| B | GLY18 |
| B | RG142 |
| G | FME1 |
| G | ASN2 |
| G | HOH57 |
| H | ILE16 |
| H | THR19 |
| H | ARG20 |
| H | HIS30 |
| H | TRP39 |
| H | RG142 |
| H | BCL43 |
| site_id | EE |
| Number of Residues | 2 |
| Details | B800 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| D | FME1 |
| E | ARG20 |
| site_id | EEA |
| Number of Residues | 2 |
| Details | B850 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| D | TRP45 |
| D | HIS31 |
| site_id | EEB |
| Number of Residues | 2 |
| Details | B850 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| E | HIS30 |
| D | TYR44 |
| site_id | HH |
| Number of Residues | 2 |
| Details | B800 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| G | FME1 |
| H | ARG20 |
| site_id | HHA |
| Number of Residues | 2 |
| Details | B850 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| G | HIS31 |
| G | TRP45 |
| site_id | HHB |
| Number of Residues | 2 |
| Details | B850 BACTERIOCHLOROPHYLL COORDINATING RESIDUES. |
| Chain | Residue |
| H | HIS30 |
| G | TYR44 |
Functional Information from PROSITE/UniProt
| site_id | PS00968 |
| Number of Residues | 17 |
| Details | ANTENNA_COMP_ALPHA Antenna complexes alpha subunits signature. ViAIlVHlaiLSHt..TWF |
| Chain | Residue | Details |
| A | VAL25-PHE41 |
| site_id | PS00969 |
| Number of Residues | 32 |
| Details | ANTENNA_COMP_BETA Antenna complexes beta subunits signature. QseelHkyvidGtrvFlglAlvAHflafsatP |
| Chain | Residue | Details |
| B | GLN7-PRO38 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 39 |
| Details | TOPO_DOM: Cytoplasmic |
| Chain | Residue | Details |
| B | ALA1-TYR14 | |
| E | ALA1-TYR14 | |
| H | ALA1-TYR14 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 63 |
| Details | TRANSMEM: Helical |
| Chain | Residue | Details |
| B | VAL15-ALA36 | |
| E | VAL15-ALA36 | |
| H | VAL15-ALA36 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 12 |
| Details | TOPO_DOM: Periplasmic |
| Chain | Residue | Details |
| B | THR37-HIS41 | |
| E | THR37-HIS41 | |
| H | THR37-HIS41 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 6 |
| Details | BINDING: axial binding residue => ECO:0000255 |
| Chain | Residue | Details |
| B | HIS30 | |
| E | HIS12 | |
| E | HIS30 | |
| H | HIS12 | |
| H | HIS30 | |
| B | HIS12 |
