1KY2
GPPNHP-BOUND YPT7P AT 1.6 A RESOLUTION
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 401 |
| Chain | Residue |
| A | THR22 |
| A | THR40 |
| A | GNP400 |
| A | HOH1008 |
| A | HOH1009 |
| site_id | AC2 |
| Number of Residues | 28 |
| Details | BINDING SITE FOR RESIDUE GNP A 400 |
| Chain | Residue |
| A | LYS21 |
| A | THR22 |
| A | SER23 |
| A | TYR33 |
| A | GLN35 |
| A | THR40 |
| A | GLY67 |
| A | ASN126 |
| A | LYS127 |
| A | ASP129 |
| A | SER158 |
| A | ALA159 |
| A | LYS160 |
| A | MG401 |
| A | HOH1006 |
| A | HOH1007 |
| A | HOH1008 |
| A | HOH1009 |
| A | HOH1010 |
| A | HOH1014 |
| A | HOH1017 |
| A | HOH1018 |
| A | HOH1070 |
| A | HOH1227 |
| A | SER17 |
| A | GLY18 |
| A | VAL19 |
| A | GLY20 |
Functional Information from PROSITE/UniProt
| site_id | PS00675 |
| Number of Residues | 14 |
| Details | SIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. VIIlGDSGVGKtsL |
| Chain | Residue | Details |
| A | VAL11-LEU24 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | Motif: {"description":"Effector region","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 18 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"1KY2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1KY3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4PHF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4PHG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"1KY2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4PHG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLN68 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLY18 |
