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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

1KXG

The 2.0 Ang Resolution Structure of BLyS, B Lymphocyte Stimulator.

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005164	molecular_function	tumor necrosis factor receptor binding
A	0006955	biological_process	immune response
A	0016020	cellular_component	membrane
B	0005164	molecular_function	tumor necrosis factor receptor binding
B	0006955	biological_process	immune response
B	0016020	cellular_component	membrane
C	0005164	molecular_function	tumor necrosis factor receptor binding
C	0006955	biological_process	immune response
C	0016020	cellular_component	membrane
D	0005164	molecular_function	tumor necrosis factor receptor binding
D	0006955	biological_process	immune response
D	0016020	cellular_component	membrane
E	0005164	molecular_function	tumor necrosis factor receptor binding
E	0006955	biological_process	immune response
E	0016020	cellular_component	membrane
F	0005164	molecular_function	tumor necrosis factor receptor binding
F	0006955	biological_process	immune response
F	0016020	cellular_component	membrane

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG A 701

Chain	Residue
A	GLN234
A	HOH504
B	GLN234
B	MG702
B	HOH1019
C	GLN234
C	HOH1017

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG B 702

Chain	Residue
A	MG701
B	HOH1019
B	HOH1020
C	HOH1017
C	HOH1018
A	HOH504
A	HOH507

site_id	AC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG D 801

Chain	Residue
D	MG802
D	HOH1013
D	HOH1014
E	HOH1020
E	HOH1021
F	HOH603
F	HOH608

site_id	AC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG D 802

Chain	Residue
D	GLN234
D	MG801
D	HOH1013
E	GLN234
E	HOH1020
F	GLN234
F	HOH603

site_id	AC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 901

Chain	Residue
A	HOH10
A	CIT889
F	HOH395
F	CIT888

site_id	AC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG F 902

Chain	Residue
A	CIT889
F	ARG214
F	LYS252
F	HOH395
F	CIT888

site_id	AC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 903

Chain	Residue
A	HOH10
A	ARG214
A	LYS252
A	CIT889
F	CIT888

site_id	AC8
Number of Residues	15
Details	BINDING SITE FOR RESIDUE CIT F 888

Chain	Residue
A	HOH4
A	HOH44
A	ARG214
A	LYS252
A	CIT889
A	MG901
A	MG903
F	ARG214
F	LYS216
F	HIS218
F	PHE220
F	GLU223
F	GLU254
F	HOH344
F	MG902

site_id	AC9
Number of Residues	15
Details	BINDING SITE FOR RESIDUE CIT A 889

Chain	Residue
A	HOH2
A	ARG214
A	LYS216
A	HIS218
A	PHE220
A	GLU223
A	GLU254
A	HOH389
A	MG901
A	MG903
F	ARG214
F	LYS252
F	HOH349
F	CIT888
F	MG902

site_id	BC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO A 1001

Chain	Residue
A	LYS160
A	PHE165
A	ASN183
A	GLN260

site_id	BC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE DIO A 1002

Chain	Residue
A	GLN234
A	SER244
A	TYR246
B	SER244
B	TYR246
C	TYR246

site_id	BC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO C 1003

Chain	Residue
A	LEU282
B	PHE194
C	PHE194
C	LEU282

site_id	BC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO A 1004

Chain	Residue
A	HOH509
A	HOH510
A	HOH511
C	HOH1020

site_id	BC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DIO B 1005

Chain	Residue
B	ILE158
B	PHE165
B	ASN183

site_id	BC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DIO C 1006

Chain	Residue
C	GLY209
C	LEU211
C	ARG231
C	CYS232
C	PRO264

site_id	BC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO C 1007

Chain	Residue
C	ASN183
C	LYS184
C	GLN260
C	PHE165

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO C 1008

Chain	Residue
C	TYR192
C	LYS252
C	HOH1022
E	HIS218

site_id	BC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DIO D 1009

Chain	Residue
D	PHE165
D	ASN183
D	GLN260

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO E 1010

Chain	Residue
D	PHE194
E	PHE194
E	LEU282
F	LEU282

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO E 1011

Chain	Residue
E	PHE165
E	ASN183
E	LYS184
E	GLN260

site_id	CC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO D 1012

Chain	Residue
D	TYR246
E	SER244
E	TYR246
F	TYR246

site_id	CC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DIO F 1013

Chain	Residue
F	PHE165
F	ASN183
F	LYS184

site_id	CC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DIO C 1014

Chain	Residue
C	ALA268
C	GLN269
C	ILE270

site_id	CC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO A 1015

Chain	Residue
A	THR157
A	ALA268
A	GLN269
A	ILE270

site_id	CC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO C 1016

Chain	Residue
C	HIS218
E	TYR192
E	LYS252
F	HOH371

site_id	CC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DIO A 1017

Chain	Residue
A	LYS215
A	LYS216
A	VAL217
A	GLY256
A	GLU258

site_id	CC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE DIO B 1018

Chain	Residue
B	GLY209
B	ARG231
B	PRO264

site_id	DC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE DIO E 1019

Chain	Residue
E	THR157
E	ALA268
E	GLN269
E	ILE270

site_id	DC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE DIO F 1020

Chain	Residue
D	PRO237
D	HOH1015
E	HOH1023
F	HOH423
F	HOH609

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	CARBOHYD: N-linked (GlcNAc...) (high mannose) asparagine

Chain	Residue	Details
A	ASN242
B	ASN242
C	ASN242
D	ASN242
E	ASN242
F	ASN242

231029

PDB entries from 2025-02-05

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