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1KL7

Crystal Structure of Threonine Synthase from Yeast

Functional Information from GO Data
ChainGOidnamespacecontents
A0004795molecular_functionthreonine synthase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006520biological_processamino acid metabolic process
A0008652biological_processamino acid biosynthetic process
A0009088biological_processthreonine biosynthetic process
A0016829molecular_functionlyase activity
A0030170molecular_functionpyridoxal phosphate binding
B0004795molecular_functionthreonine synthase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006520biological_processamino acid metabolic process
B0008652biological_processamino acid biosynthetic process
B0009088biological_processthreonine biosynthetic process
B0016829molecular_functionlyase activity
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE PLP A 1400
ChainResidue
APHE123
AALA330
AHIS422
ATHR449
AALA450
AHOH1401
AHOH1454
AHOH1548
ALYS124
AASP163
ASER276
AGLY277
AASN278
APHE279
AGLY280
AASP281

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE PLP B 1400
ChainResidue
BPHE123
BLYS124
BASP163
BSER276
BGLY277
BASN278
BPHE279
BGLY280
BASP281
BALA330
BHIS422
BTHR449
BALA450
BHOH1405
BHOH1442
BHOH1572

Functional Information from PROSITE/UniProt
site_idPS00165
Number of Residues15
DetailsDEHYDRATASE_SER_THR Serine/threonine dehydratases pyridoxal-phosphate attachment site. ElfhgpTYAFKDVAL
ChainResidueDetails
AGLU114-LEU128

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11756443","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KL7","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsModified residue: {"description":"N6-(pyridoxal phosphate)lysine","evidences":[{"source":"PubMed","id":"11756443","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"1KL7","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
Details
ChainResidueDetails
ALYS124

site_idMCSA1
Number of Residues1
DetailsM-CSA 730
ChainResidueDetails
AGLY132covalently attached, electron pair acceptor, electron pair donor, increase nucleophilicity, nucleofuge, nucleophile, proton acceptor, proton donor, proton relay

site_idMCSA2
Number of Residues1
DetailsM-CSA 730
ChainResidueDetails
BGLY132covalently attached, electron pair acceptor, electron pair donor, increase nucleophilicity, nucleofuge, nucleophile, proton acceptor, proton donor, proton relay

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PDB entries from 2025-12-03

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