1JTP
Degenerate interfaces in antigen-antibody complexes
Functional Information from GO Data
Chain | GOid | namespace | contents |
L | 0003796 | molecular_function | lysozyme activity |
L | 0005539 | molecular_function | glycosaminoglycan binding |
L | 0005576 | cellular_component | extracellular region |
L | 0005615 | cellular_component | extracellular space |
L | 0005737 | cellular_component | cytoplasm |
L | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
L | 0016998 | biological_process | cell wall macromolecule catabolic process |
L | 0031640 | biological_process | killing of cells of another organism |
L | 0042742 | biological_process | defense response to bacterium |
L | 0042802 | molecular_function | identical protein binding |
L | 0050830 | biological_process | defense response to Gram-positive bacterium |
M | 0003796 | molecular_function | lysozyme activity |
M | 0005539 | molecular_function | glycosaminoglycan binding |
M | 0005576 | cellular_component | extracellular region |
M | 0005615 | cellular_component | extracellular space |
M | 0005737 | cellular_component | cytoplasm |
M | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
M | 0016998 | biological_process | cell wall macromolecule catabolic process |
M | 0031640 | biological_process | killing of cells of another organism |
M | 0042742 | biological_process | defense response to bacterium |
M | 0042802 | molecular_function | identical protein binding |
M | 0050830 | biological_process | defense response to Gram-positive bacterium |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA A 501 |
Chain | Residue |
A | ASP99 |
A | THR101 |
A | GLY119 |
A | ASP121 |
A | HOH510 |
A | HOH537 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA B 502 |
Chain | Residue |
B | ASP121 |
B | HOH511 |
M | HOH559 |
B | ASP99 |
B | THR101 |
B | GLY119 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA L 503 |
Chain | Residue |
L | SER60 |
L | CYS64 |
L | SER72 |
L | LYS73 |
L | HOH515 |
L | HOH568 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA M 504 |
Chain | Residue |
M | SER60 |
M | CYS64 |
M | SER72 |
M | LYS73 |
M | HOH520 |
M | HOH533 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA L 505 |
Chain | Residue |
A | SER105 |
L | GLU35 |
L | FMT406 |
L | HOH526 |
L | HOH550 |
L | HOH551 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT A 401 |
Chain | Residue |
A | ALA6 |
A | TYR94 |
A | TYR95 |
A | CYS96 |
A | GLY124 |
A | GLY126 |
A | THR127 |
site_id | AC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE FMT B 402 |
Chain | Residue |
B | ALA6 |
B | TYR94 |
B | TYR95 |
B | CYS96 |
B | GLY124 |
B | GLN125 |
B | GLY126 |
B | THR127 |
B | HOH566 |
site_id | AC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT M 403 |
Chain | Residue |
M | ASN65 |
M | GLY67 |
M | ARG68 |
M | THR69 |
M | SER72 |
M | HOH520 |
M | HOH533 |
site_id | AC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE FMT M 404 |
Chain | Residue |
B | HOH511 |
M | HOH543 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE FMT M 405 |
Chain | Residue |
L | ASN113 |
L | ARG114 |
L | HOH540 |
M | ARG5 |
M | CYS6 |
M | HOH511 |
site_id | BC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FMT L 406 |
Chain | Residue |
L | GLU35 |
L | VAL109 |
L | ALA110 |
L | NA505 |
L | HOH551 |
L | HOH571 |
L | HOH576 |
Functional Information from PROSITE/UniProt
site_id | PS00128 |
Number of Residues | 19 |
Details | GLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC |
Chain | Residue | Details |
L | CYS76-CYS94 |
site_id | PS00879 |
Number of Residues | 17 |
Details | ODR_DC_2_2 Orn/DAP/Arg decarboxylases family 2 signature 2. Gkereg.VaAINMGGGIT |
Chain | Residue | Details |
A | GLY42-THR58 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 132l |
Chain | Residue | Details |
L | GLU35 | |
L | ASP52 |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 132l |
Chain | Residue | Details |
M | GLU35 | |
M | ASP52 |