Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004112 | molecular_function | cyclic-nucleotide phosphodiesterase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006388 | biological_process | tRNA splicing, via endonucleolytic cleavage and ligation |
A | 0016787 | molecular_function | hydrolase activity |
B | 0004112 | molecular_function | cyclic-nucleotide phosphodiesterase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006388 | biological_process | tRNA splicing, via endonucleolytic cleavage and ligation |
B | 0016787 | molecular_function | hydrolase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE SO4 A 211 |
Chain | Residue |
A | HIS42 |
A | HOH308 |
A | HOH413 |
A | THR44 |
A | HIS119 |
A | SER121 |
A | TYR124 |
A | HOH302 |
A | HOH303 |
A | HOH304 |
A | HOH305 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 212 |
Chain | Residue |
A | ARG31 |
A | ARG31 |
A | ARG31 |
A | ARG38 |
A | ARG38 |
A | ARG38 |
A | HOH393 |
site_id | AC3 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE SO4 B 221 |
Chain | Residue |
B | HIS42 |
B | THR44 |
B | HIS119 |
B | SER121 |
B | TYR124 |
B | HOH502 |
B | HOH503 |
B | HOH504 |
B | HOH505 |
B | HOH508 |
B | HOH662 |
site_id | AC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 B 222 |
Chain | Residue |
B | ARG31 |
B | ARG31 |
B | ARG31 |
B | ARG38 |
B | ARG38 |
B | ARG38 |
B | HOH518 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor/acceptor |
Chain | Residue | Details |
A | HIS42 | |
A | HIS119 | |
B | HIS42 | |
B | HIS119 | |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | BINDING: |
Chain | Residue | Details |
A | THR44 | |
A | SER121 | |
A | TYR124 | |
B | THR44 | |
B | SER121 | |
B | TYR124 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 5 |
Details | a catalytic site defined by CSA, PubMed 11080166 |
Chain | Residue | Details |
A | HIS42 | |
A | SER121 | |
A | MET117 | |
A | HIS119 | |
A | TYR124 | |
site_id | CSA2 |
Number of Residues | 5 |
Details | a catalytic site defined by CSA, PubMed 11080166 |
Chain | Residue | Details |
B | HIS42 | |
B | SER121 | |
B | MET117 | |
B | HIS119 | |
B | TYR124 | |
site_id | MCSA1 |
Number of Residues | 6 |
Details | M-CSA 794 |
Chain | Residue | Details |
A | HIS42 | proton donor |
A | THR44 | electrostatic stabiliser |
A | MET117 | electrostatic stabiliser, increase basicity |
A | HIS119 | increase nucleophilicity, proton acceptor |
A | SER121 | electrostatic stabiliser |
A | TYR124 | electrostatic stabiliser |
site_id | MCSA2 |
Number of Residues | 6 |
Details | M-CSA 794 |
Chain | Residue | Details |
B | HIS42 | proton donor |
B | THR44 | electrostatic stabiliser |
B | MET117 | electrostatic stabiliser, increase basicity |
B | HIS119 | increase nucleophilicity, proton acceptor |
B | SER121 | electrostatic stabiliser |
B | TYR124 | electrostatic stabiliser |