1JBM
Heptameric crystal structure of Mth649, an Sm-like archaeal protein from Methanobacterium thermautotrophicum
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000398 | biological_process | mRNA splicing, via spliceosome |
| A | 0003723 | molecular_function | RNA binding |
| A | 0034715 | cellular_component | pICln-Sm protein complex |
| A | 0120114 | cellular_component | Sm-like protein family complex |
| A | 1990904 | cellular_component | ribonucleoprotein complex |
| B | 0000398 | biological_process | mRNA splicing, via spliceosome |
| B | 0003723 | molecular_function | RNA binding |
| B | 0034715 | cellular_component | pICln-Sm protein complex |
| B | 0120114 | cellular_component | Sm-like protein family complex |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0000398 | biological_process | mRNA splicing, via spliceosome |
| C | 0003723 | molecular_function | RNA binding |
| C | 0034715 | cellular_component | pICln-Sm protein complex |
| C | 0120114 | cellular_component | Sm-like protein family complex |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0000398 | biological_process | mRNA splicing, via spliceosome |
| D | 0003723 | molecular_function | RNA binding |
| D | 0034715 | cellular_component | pICln-Sm protein complex |
| D | 0120114 | cellular_component | Sm-like protein family complex |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0000398 | biological_process | mRNA splicing, via spliceosome |
| E | 0003723 | molecular_function | RNA binding |
| E | 0034715 | cellular_component | pICln-Sm protein complex |
| E | 0120114 | cellular_component | Sm-like protein family complex |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 0000398 | biological_process | mRNA splicing, via spliceosome |
| F | 0003723 | molecular_function | RNA binding |
| F | 0034715 | cellular_component | pICln-Sm protein complex |
| F | 0120114 | cellular_component | Sm-like protein family complex |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0000398 | biological_process | mRNA splicing, via spliceosome |
| G | 0003723 | molecular_function | RNA binding |
| G | 0034715 | cellular_component | pICln-Sm protein complex |
| G | 0120114 | cellular_component | Sm-like protein family complex |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO D 2001 |
| Chain | Residue |
| C | VAL11 |
| C | GLN12 |
| D | PHE43 |
| D | ASP44 |
| D | LEU45 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO F 2002 |
| Chain | Residue |
| F | VAL39 |
| F | ASN52 |
| F | ASP53 |
| F | HOH2028 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO F 2003 |
| Chain | Residue |
| E | LYS29 |
| E | VAL77 |
| E | ACY1003 |
| E | HOH2057 |
| F | ARG34 |
| F | GLU56 |
| F | HOH2023 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 2004 |
| Chain | Residue |
| C | VAL39 |
| C | LYS41 |
| C | ASN52 |
| C | ASP53 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO E 2005 |
| Chain | Residue |
| A | GLY19 |
| E | ASN23 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 2006 |
| Chain | Residue |
| D | LEU30 |
| D | LYS31 |
| D | ARG34 |
| D | ASN75 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO C 2007 |
| Chain | Residue |
| B | LEU45 |
| B | HIS46 |
| B | HOH110 |
| C | HIS46 |
| C | ASN48 |
| C | ARG72 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO E 2008 |
| Chain | Residue |
| D | VAL77 |
| D | ACY1004 |
| D | HOH2011 |
| E | LEU30 |
| E | LYS31 |
| E | ASN75 |
| E | HOH2041 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO F 2009 |
| Chain | Residue |
| G | THR68 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO G 2010 |
| Chain | Residue |
| F | LEU45 |
| G | HIS46 |
| G | EDO2011 |
| site_id | BC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO G 2011 |
| Chain | Residue |
| F | LEU45 |
| F | HIS46 |
| G | ASN48 |
| G | ARG72 |
| G | EDO2010 |
| G | HOH2017 |
| G | HOH2049 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACY C 1001 |
| Chain | Residue |
| C | ALA17 |
| C | SER21 |
| C | SER80 |
| C | ARG81 |
| D | THR68 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACY A 1002 |
| Chain | Residue |
| A | ALA17 |
| A | SER21 |
| A | SER80 |
| A | HOH1036 |
| B | THR68 |
| B | LEU70 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACY E 1003 |
| Chain | Residue |
| E | LYS31 |
| E | GLY32 |
| F | ARG34 |
| F | EDO2003 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACY D 1004 |
| Chain | Residue |
| D | GLY32 |
| D | HOH2011 |
| D | HOH2021 |
| E | EDO2008 |
| site_id | BC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACY F 1005 |
| Chain | Residue |
| F | GLN12 |
| F | ARG13 |
| G | SER42 |
| G | PHE43 |
