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1JBB

Ubiquitin Conjugating Enzyme, Ubc13

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000209biological_processprotein polyubiquitination
A0000329cellular_componentfungal-type vacuole membrane
A0004842molecular_functionubiquitin-protein transferase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006301biological_processDNA damage tolerance
A0010994biological_processfree ubiquitin chain polymerization
A0016567biological_processprotein ubiquitination
A0016740molecular_functiontransferase activity
A0031371cellular_componentubiquitin conjugating enzyme complex
A0044395biological_processprotein targeting to vacuolar membrane
A0061631molecular_functionubiquitin conjugating enzyme activity
A0070534biological_processprotein K63-linked ubiquitination
B0000166molecular_functionnucleotide binding
B0000209biological_processprotein polyubiquitination
B0000329cellular_componentfungal-type vacuole membrane
B0004842molecular_functionubiquitin-protein transferase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006301biological_processDNA damage tolerance
B0010994biological_processfree ubiquitin chain polymerization
B0016567biological_processprotein ubiquitination
B0016740molecular_functiontransferase activity
B0031371cellular_componentubiquitin conjugating enzyme complex
B0044395biological_processprotein targeting to vacuolar membrane
B0061631molecular_functionubiquitin conjugating enzyme activity
B0070534biological_processprotein K63-linked ubiquitination
Functional Information from PROSITE/UniProt
site_idPS00183
Number of Residues16
DetailsUBC_1 Ubiquitin-conjugating (UBC) active site signature. YHPNIdrl.GrICLdvL
ChainResidueDetails
ATYR76-LEU91

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues292
DetailsDomain: {"description":"UBC core","evidences":[{"source":"PROSITE-ProRule","id":"PRU00388","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Glycyl thioester intermediate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00388","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

245011

PDB entries from 2025-11-19

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