Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MN A 3000 |
Chain | Residue |
A | ASP12 |
A | GLU14 |
A | ASP167 |
A | TMP2000 |
A | HOH5002 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MN A 3001 |
Chain | Residue |
A | HOH5146 |
A | ASP12 |
A | TMP2000 |
A | HOH5040 |
A | HOH5145 |
site_id | AC3 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE TMP A 2000 |
Chain | Residue |
A | ASP12 |
A | THR13 |
A | GLU14 |
A | THR15 |
A | MET18 |
A | GLU61 |
A | VAL65 |
A | HIS66 |
A | PHE102 |
A | HIS162 |
A | ASP167 |
A | MN3000 |
A | MN3001 |
A | HOH5002 |
A | HOH5137 |
site_id | AC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE EDO A 4000 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 5000 |
Chain | Residue |
A | ARG7 |
A | GLN8 |
A | VAL38 |
A | VAL39 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | ACT_SITE: Proton acceptor |
Chain | Residue | Details |
A | HIS162 | |
site_id | SWS_FT_FI2 |
Number of Residues | 5 |
Details | BINDING: |
Chain | Residue | Details |
A | ASP12 | |
A | GLU14 | |
A | GLU61 | |
A | HIS66 | |
A | ASP167 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | a catalytic site defined by CSA, PubMed 11937058 |
Chain | Residue | Details |
A | GLU61 | |
A | GLU14 | |
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 754 |
Chain | Residue | Details |
A | ASP12 | metal ligand |
A | GLU14 | hydrogen bond acceptor, metal ligand, proton acceptor, proton donor |
A | GLU61 | electrostatic stabiliser, increase basicity, polar interaction |
A | HIS162 | proton acceptor, proton donor |
A | ASP167 | metal ligand |