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1J0O

High Resolution Crystal Structure of the wild type Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F

Functional Information from GO Data
ChainGOidnamespacecontents
A0009055molecular_functionelectron transfer activity
A0009061biological_processanaerobic respiration
A0020037molecular_functionheme binding
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE HEM A 1004
ChainResidue
AMET11
ATYR66
AHIS70
ACYS79
AVAL80
AHIS83
ALEU97
ATHR98
AGLY99
ACYS100
ACYS105
AASP12
AHIS106
AEOH2001
AEOH2003
AHOH3013
AHOH3018
AHOH3028
AHOH3039
ALYS13
ATHR14
AGLN16
APRO17
AVAL18
AGLY39
ATYR65

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM A 1002
ChainResidue
AHIS35
AASP42
AGLN44
ALYS45
ACYS46
ACYS51
AHIS52
AHIS67
AALA68
ATHR74
ALYS75
APHE76
AHOH3019
AHOH3061
AHOH3216
AHOH3270

site_idAC3
Number of Residues24
DetailsBINDING SITE FOR RESIDUE HEM A 1001
ChainResidue
APRO2
ALYS3
AALA4
APRO5
ALEU9
APHE20
AHIS22
AHIS25
AVAL28
ACYS30
ACYS33
AHIS34
ATYR43
ALYS45
ACYS46
AHEM1003
AEOH2004
AEOH2008
AHOH3077
AHOH3101
AHOH3128
AHOH3183
AHOH3307
AHOH3322

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM A 1003
ChainResidue
AVAL18
APHE20
AASN21
ATHR24
AHIS25
AVAL28
ACYS79
ACYS82
AHIS83
ALYS93
ALYS104
AHEM1001
AHOH3007
AHOH3033
AHOH3051
AHOH3102
AHOH3187
AHOH3337

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EOH A 2001
ChainResidue
ACYS100
AHEM1004
AHOH3319

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EOH A 2002
ChainResidue
APRO5
AALA6
AHOH3095
AHOH3318

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EOH A 2003
ChainResidue
ATHR98
ACYS100
AHEM1004
AHOH3100
AHOH3122
AHOH3157
AHOH3182

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EOH A 2004
ChainResidue
ACYS46
AALA47
ATYR65
AHEM1001
AHOH3032
ALYS13

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EOH A 2005
ChainResidue
AALA1
AHIS106
ASER107
AHOH3024
AHOH3109
AHOH3131
AHOH3165
AHOH3166

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EOH A 2006
ChainResidue
ALYS57
ATYR66
AHOH3238
AHOH3285

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EOH A 2007
ChainResidue
AALA47
AASP53
AMET55
AHOH3132
AHOH3146
AHOH3198

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EOH A 2008
ChainResidue
ACYS100
AHEM1001
AHOH3100
AHOH3101
AHOH3322
AHOH3332

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: axial binding residue
ChainResidueDetails
AHIS22
AHIS25
AHIS34
AHIS35
AHIS52
AHIS70
AHIS83
AHIS106

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: covalent
ChainResidueDetails
ACYS30
ACYS33
ACYS46
ACYS51
ACYS79
ACYS82
ACYS100
ACYS105

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PDB entries from 2024-07-17

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