1HQC
STRUCTURE OF RUVB FROM THERMUS THERMOPHILUS HB8
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000400 | molecular_function | four-way junction DNA binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003689 | molecular_function | DNA clamp loader activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006281 | biological_process | DNA repair |
| A | 0006310 | biological_process | DNA recombination |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0009378 | molecular_function | four-way junction helicase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0032508 | biological_process | DNA duplex unwinding |
| A | 0036121 | molecular_function | double-stranded DNA helicase activity |
| A | 0048476 | cellular_component | Holliday junction resolvase complex |
| A | 0061749 | molecular_function | forked DNA-dependent helicase activity |
| A | 0061775 | molecular_function | cohesin loader activity |
| A | 0140584 | molecular_function | chromatin extrusion motor activity |
| A | 0140588 | biological_process | chromatin looping |
| A | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
| A | 0140849 | molecular_function | ATP-dependent H2AZ histone chaperone activity |
| A | 1990518 | molecular_function | single-stranded 3'-5' DNA helicase activity |
| B | 0000400 | molecular_function | four-way junction DNA binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003689 | molecular_function | DNA clamp loader activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006281 | biological_process | DNA repair |
| B | 0006310 | biological_process | DNA recombination |
| B | 0006338 | biological_process | chromatin remodeling |
| B | 0009378 | molecular_function | four-way junction helicase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016887 | molecular_function | ATP hydrolysis activity |
| B | 0032508 | biological_process | DNA duplex unwinding |
| B | 0036121 | molecular_function | double-stranded DNA helicase activity |
| B | 0048476 | cellular_component | Holliday junction resolvase complex |
| B | 0061749 | molecular_function | forked DNA-dependent helicase activity |
| B | 0061775 | molecular_function | cohesin loader activity |
| B | 0140584 | molecular_function | chromatin extrusion motor activity |
| B | 0140588 | biological_process | chromatin looping |
| B | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
| B | 0140849 | molecular_function | ATP-dependent H2AZ histone chaperone activity |
| B | 1990518 | molecular_function | single-stranded 3'-5' DNA helicase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 401 |
| Chain | Residue |
| A | THR52 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG B 402 |
| Chain | Residue |
| B | VAL68 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ADE A 501 |
| Chain | Residue |
| A | TYR14 |
| A | ILE15 |
| A | THR53 |
| A | ARG179 |
| A | LYS208 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ADE B 502 |
| Chain | Residue |
| B | ILE15 |
| B | TYR168 |
| B | LYS208 |
| B | ARG7 |
| B | TYR14 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:11171970, ECO:0000269|PubMed:12408833, ECO:0000312|PDB:1HQC, ECO:0000312|PDB:1IXS |
| Chain | Residue | Details |
| A | TYR14 | |
| B | TYR14 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:11171970, ECO:0000312|PDB:1HQC, ECO:0000312|PDB:1IXS |
| Chain | Residue | Details |
| A | ILE15 | |
| B | ILE15 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00016, ECO:0000269|PubMed:12408833, ECO:0000312|PDB:1IXR |
| Chain | Residue | Details |
| A | GLY48 | |
| B | GLY48 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00016, ECO:0000269|PubMed:12408833, ECO:0000312|PDB:1IXR, ECO:0000312|PDB:1IXS |
| Chain | Residue | Details |
| A | LYS51 | |
| A | THR53 | |
| B | LYS51 | |
| B | THR53 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 6 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00016 |
| Chain | Residue | Details |
| A | THR52 | |
| A | ARG297 | |
| A | ARG302 | |
| B | THR52 | |
| B | ARG297 | |
| B | ARG302 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000305|PubMed:12408833 |
| Chain | Residue | Details |
| A | ASP97 | |
| A | THR146 | |
| B | ASP97 | |
| B | THR146 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00016, ECO:0000269|PubMed:11171970, ECO:0000269|PubMed:12408833, ECO:0000312|PDB:1HQC, ECO:0000312|PDB:1IXS |
| Chain | Residue | Details |
| A | TYR168 | |
| B | TYR168 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00016, ECO:0000305|PubMed:12408833 |
| Chain | Residue | Details |
| A | ARG205 | |
| B | ARG205 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 2 |
| Details | a catalytic site defined by CSA, PubMed 10464259, 11171970 |
| Chain | Residue | Details |
| A | THR146 | |
| A | ARG205 |
| site_id | CSA2 |
| Number of Residues | 2 |
| Details | a catalytic site defined by CSA, PubMed 10464259, 11171970 |
| Chain | Residue | Details |
| B | THR146 | |
| B | ARG205 |
| site_id | MCSA1 |
| Number of Residues | 5 |
| Details | M-CSA 780 |
| Chain | Residue | Details |
| A | LYS51 | |
| A | THR52 | |
| A | ASP97 | |
| A | THR146 | electrostatic stabiliser |
| A | ARG205 | electrostatic stabiliser |
| site_id | MCSA2 |
| Number of Residues | 5 |
| Details | M-CSA 780 |
| Chain | Residue | Details |
| B | LYS51 | |
| B | THR52 | |
| B | ASP97 | |
| B | THR146 | electrostatic stabiliser |
| B | ARG205 | electrostatic stabiliser |
