1HI0

RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus initiation complex

Functional Information from GO Data

Chain	GOid	namespace	contents
P	0000166	molecular_function	nucleotide binding
P	0001172	biological_process	RNA-templated transcription
P	0003723	molecular_function	RNA binding
P	0003968	molecular_function	RNA-directed RNA polymerase activity
P	0006351	biological_process	DNA-templated transcription
P	0016740	molecular_function	transferase activity
P	0016779	molecular_function	nucleotidyltransferase activity
P	0019079	biological_process	viral genome replication
P	0034062	molecular_function	5'-3' RNA polymerase activity
P	0039694	biological_process	viral RNA genome replication
P	0046872	molecular_function	metal ion binding
P	0050265	molecular_function	RNA uridylyltransferase activity
Q	0000166	molecular_function	nucleotide binding
Q	0001172	biological_process	RNA-templated transcription
Q	0003723	molecular_function	RNA binding
Q	0003968	molecular_function	RNA-directed RNA polymerase activity
Q	0006351	biological_process	DNA-templated transcription
Q	0016740	molecular_function	transferase activity
Q	0016779	molecular_function	nucleotidyltransferase activity
Q	0019079	biological_process	viral genome replication
Q	0034062	molecular_function	5'-3' RNA polymerase activity
Q	0039694	biological_process	viral RNA genome replication
Q	0046872	molecular_function	metal ion binding
Q	0050265	molecular_function	RNA uridylyltransferase activity
R	0000166	molecular_function	nucleotide binding
R	0001172	biological_process	RNA-templated transcription
R	0003723	molecular_function	RNA binding
R	0003968	molecular_function	RNA-directed RNA polymerase activity
R	0006351	biological_process	DNA-templated transcription
R	0016740	molecular_function	transferase activity
R	0016779	molecular_function	nucleotidyltransferase activity
R	0019079	biological_process	viral genome replication
R	0034062	molecular_function	5'-3' RNA polymerase activity
R	0039694	biological_process	viral RNA genome replication
R	0046872	molecular_function	metal ion binding
R	0050265	molecular_function	RNA uridylyltransferase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MN P 665

Chain	Residue
P	ASP454
P	GLU491
P	ALA495

---

site_id	AC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG P 668

Chain	Residue
P	VAL325
P	ASP453
P	GTP667

---

site_id	AC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG P 669

Chain	Residue
P	GTP666
P	GTP667

---

site_id	AC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MN Q 665

Chain	Residue
Q	GLU491
Q	ALA495
Q	ASP454

---

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG Q 668

Chain	Residue
Q	VAL325
Q	ASP453
Q	GTP667

---

site_id	AC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG Q 669

Chain	Residue
Q	GTP666
Q	GTP667

---

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MN R 665

Chain	Residue
R	ASP454
R	GLU491
R	ALA495

---

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG R 668

Chain	Residue
R	VAL325
R	ASP453
R	GTP667

---

site_id	AC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG R 669

Chain	Residue
R	GTP666
R	GTP667

---

site_id	BC1
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GTP P 666

Chain	Residue
D	DC6
P	ARG204
P	GLN206
P	GLU529
P	ASN626
P	GLN629
P	TYR630
P	GTP667
P	MG669

---

site_id	BC2
Number of Residues	14
Details	BINDING SITE FOR RESIDUE GTP P 667

Chain	Residue
D	DC5
D	DC6
P	ARG204
P	ARG268
P	ARG270
P	ASP327
P	HIS328
P	ASP329
P	SER393
P	SER452
P	ASP453
P	GTP666
P	MG668
P	MG669

---

site_id	BC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GTP Q 666

Chain	Residue
E	DC6
Q	ARG204
Q	GLN206
Q	GLU529
Q	ASN626
Q	GLN629
Q	TYR630
Q	GTP667
Q	MG669

---

site_id	BC4
Number of Residues	14
Details	BINDING SITE FOR RESIDUE GTP Q 667

Chain	Residue
E	DC5
E	DC6
Q	ARG204
Q	ARG268
Q	ARG270
Q	ASP327
Q	HIS328
Q	ASP329
Q	SER393
Q	SER452
Q	ASP453
Q	GTP666
Q	MG668
Q	MG669

---

site_id	BC5
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GTP R 666

Chain	Residue
F	DC6
R	ARG204
R	GLN206
R	GLU529
R	ASN626
R	GLN629
R	TYR630
R	GTP667
R	MG669

---

site_id	BC6
Number of Residues	14
Details	BINDING SITE FOR RESIDUE GTP R 667

Chain	Residue
F	DC5
F	DC6
R	ARG204
R	ARG268
R	ARG270
R	ASP327
R	HIS328
R	ASP329
R	SER393
R	SER452
R	ASP453
R	GTP666
R	MG668
R	MG669

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	525
Details	Domain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	9
Details	Binding site: {}

Chain

Residue

Details

---