1H9U
The structure of the human retinoid-X-receptor beta ligand binding domain in complex with the specific synthetic agonist LG100268
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003707 | molecular_function | nuclear steroid receptor activity |
A | 0005634 | cellular_component | nucleus |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
A | 0008270 | molecular_function | zinc ion binding |
B | 0003677 | molecular_function | DNA binding |
B | 0003707 | molecular_function | nuclear steroid receptor activity |
B | 0005634 | cellular_component | nucleus |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0008270 | molecular_function | zinc ion binding |
C | 0003677 | molecular_function | DNA binding |
C | 0003707 | molecular_function | nuclear steroid receptor activity |
C | 0005634 | cellular_component | nucleus |
C | 0006355 | biological_process | regulation of DNA-templated transcription |
C | 0008270 | molecular_function | zinc ion binding |
D | 0003677 | molecular_function | DNA binding |
D | 0003707 | molecular_function | nuclear steroid receptor activity |
D | 0005634 | cellular_component | nucleus |
D | 0006355 | biological_process | regulation of DNA-templated transcription |
D | 0008270 | molecular_function | zinc ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NI A 2 |
Chain | Residue |
A | CL3 |
A | HIS402 |
A | HIS404 |
site_id | AC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL A 3 |
Chain | Residue |
A | NI2 |
A | HIS404 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NI B 2 |
Chain | Residue |
B | CL3 |
B | HIS402 |
B | HIS404 |
site_id | AC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL B 3 |
Chain | Residue |
B | HIS404 |
B | NI2 |
site_id | AC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE NI C 2 |
Chain | Residue |
C | HIS402 |
C | HIS404 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE NI D 2 |
Chain | Residue |
D | HIS402 |
D | HIS404 |
site_id | AC7 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE LG2 A 1 |
Chain | Residue |
A | ILE339 |
A | ALA342 |
A | ALA343 |
A | GLN346 |
A | TRP376 |
A | LEU380 |
A | ILE381 |
A | PHE384 |
A | ARG387 |
A | LEU397 |
A | ALA398 |
A | ILE416 |
A | CYS503 |
A | HIS506 |
A | HOH2001 |
site_id | AC8 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE LG2 B 1 |
Chain | Residue |
B | ILE339 |
B | ALA342 |
B | ALA343 |
B | GLN346 |
B | LEU380 |
B | ILE381 |
B | PHE384 |
B | ARG387 |
B | LEU397 |
B | ALA398 |
B | ILE416 |
B | CYS503 |
B | HIS506 |
site_id | AC9 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE LG2 C 1 |
Chain | Residue |
C | ILE339 |
C | ALA342 |
C | ALA343 |
C | GLN346 |
C | TRP376 |
C | LEU380 |
C | ILE381 |
C | ARG387 |
C | LEU397 |
C | ALA398 |
C | CYS503 |
C | HIS506 |
C | HOH2001 |
site_id | BC1 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE LG2 D 1 |
Chain | Residue |
D | ILE339 |
D | ALA342 |
D | ALA343 |
D | GLN346 |
D | TRP376 |
D | LEU380 |
D | ILE381 |
D | PHE384 |
D | ARG387 |
D | LEU397 |
D | ALA398 |
D | ILE416 |
D | CYS503 |
D | HIS506 |