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1GLM

REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100

Functional Information from GO Data
ChainGOidnamespacecontents
A0004339molecular_functionglucan 1,4-alpha-glucosidase activity
A0005975biological_processcarbohydrate metabolic process
A0005976biological_processpolysaccharide metabolic process
Functional Information from PDB Data
site_idACT
Number of Residues4
DetailsRESIDUES THAT BIND ACARBOSE AND 1-DEOXYNOJIRIMYCIN AT SUBSITE 1 OF THE ACTIVE SITE
ChainResidue
AASP55
AARG305
ALEU177
AARG54

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DKSDGDELSarDL
ChainResidueDetails
AASP403-LEU415

site_idPS00820
Number of Residues11
DetailsGLUCOAMYLASE Glucoamylase active site region signature. TGy.DlWEEvnG
ChainResidueDetails
ATHR173-GLY183

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU10051, ECO:0000269|PubMed:1970434
ChainResidueDetails
ALEU177

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU10051, ECO:0000269|PubMed:1970434
ChainResidueDetails
AGLU180

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AGLY121

site_idSWS_FT_FI4
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine
ChainResidueDetails
AGLN172
AGLY396

site_idSWS_FT_FI5
Number of Residues2
DetailsCARBOHYD: O-linked (Man) serine => ECO:0000250
ChainResidueDetails
AALA442
AILE469

site_idSWS_FT_FI6
Number of Residues5
DetailsCARBOHYD: O-linked (Man) serine
ChainResidueDetails
ASER444
AVAL445
AALA454
ASER460
AVAL461

site_idSWS_FT_FI7
Number of Residues3
DetailsCARBOHYD: O-linked (Man) threonine
ChainResidueDetails
ASER453
AVAL463
ASER465

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1agm
ChainResidueDetails
AGLU179
AGLU400

site_idMCSA1
Number of Residues5
DetailsM-CSA 393
ChainResidueDetails
AGLY121transition state stabiliser
ALEU177proton shuttle (general acid/base), transition state stabiliser
AGLU180proton shuttle (general acid/base)
AVAL181activator
AGLN401activator

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PDB entries from 2024-07-24

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