1GA5
CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0043565 | molecular_function | sequence-specific DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0043565 | molecular_function | sequence-specific DNA binding |
| E | 0003700 | molecular_function | DNA-binding transcription factor activity |
| E | 0006355 | biological_process | regulation of DNA-templated transcription |
| E | 0008270 | molecular_function | zinc ion binding |
| E | 0043565 | molecular_function | sequence-specific DNA binding |
| F | 0003700 | molecular_function | DNA-binding transcription factor activity |
| F | 0006355 | biological_process | regulation of DNA-templated transcription |
| F | 0008270 | molecular_function | zinc ion binding |
| F | 0043565 | molecular_function | sequence-specific DNA binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 450 |
| Chain | Residue |
| A | CYS1 |
| A | CYS4 |
| A | CYS18 |
| A | CYS21 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 451 |
| Chain | Residue |
| A | CYS37 |
| A | CYS43 |
| A | CYS53 |
| A | CYS56 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 550 |
| Chain | Residue |
| B | CYS4 |
| B | CYS18 |
| B | CYS21 |
| B | CYS1 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 551 |
| Chain | Residue |
| B | CYS37 |
| B | CYS43 |
| B | CYS53 |
| B | CYS56 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN E 450 |
| Chain | Residue |
| E | CYS1 |
| E | CYS4 |
| E | CYS18 |
| E | CYS21 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN E 451 |
| Chain | Residue |
| E | CYS37 |
| E | CYS43 |
| E | CYS53 |
| E | CYS56 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN F 550 |
| Chain | Residue |
| F | CYS1 |
| F | CYS4 |
| F | CYS18 |
| F | CYS21 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN F 551 |
| Chain | Residue |
| F | CYS37 |
| F | CYS43 |
| F | CYS53 |
| F | CYS56 |
Functional Information from PROSITE/UniProt
| site_id | PS00031 |
| Number of Residues | 27 |
| Details | NUCLEAR_REC_DBD_1 Nuclear hormones receptors DNA-binding region signature. CkvCg.Dvasgf.HYgvlaCegCkgFFrR |
| Chain | Residue | Details |
| A | CYS1-ARG27 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 304 |
| Details | DNA_BIND: Nuclear receptor => ECO:0000255|PROSITE-ProRule:PRU00407 |
| Chain | Residue | Details |
| A | VAL-2-PHE73 | |
| B | VAL-2-PHE73 | |
| E | VAL-2-PHE73 | |
| F | VAL-2-PHE73 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 176 |
| Details | ZN_FING: NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407 |
| Chain | Residue | Details |
| A | CYS1-CYS21 | |
| A | CYS37-CYS61 | |
| B | CYS1-CYS21 | |
| B | CYS37-CYS61 | |
| E | CYS1-CYS21 | |
| E | CYS37-CYS61 | |
| F | CYS1-CYS21 | |
| F | CYS37-CYS61 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | MOD_RES: N6-acetyllysine; by KAT5 => ECO:0000250 |
| Chain | Residue | Details |
| A | LYS59 | |
| A | LYS60 | |
| B | LYS59 | |
| B | LYS60 | |
| E | LYS59 | |
| E | LYS60 | |
| F | LYS59 | |
| F | LYS60 |
