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1FIU

TETRAMERIC RESTRICTION ENDONUCLEASE NGOMIV IN COMPLEX WITH CLEAVED DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0004519molecular_functionendonuclease activity
A0009036molecular_functiontype II site-specific deoxyribonuclease activity
A0009307biological_processDNA restriction-modification system
A0046872molecular_functionmetal ion binding
B0004519molecular_functionendonuclease activity
B0009036molecular_functiontype II site-specific deoxyribonuclease activity
B0009307biological_processDNA restriction-modification system
B0046872molecular_functionmetal ion binding
C0004519molecular_functionendonuclease activity
C0009036molecular_functiontype II site-specific deoxyribonuclease activity
C0009307biological_processDNA restriction-modification system
C0046872molecular_functionmetal ion binding
D0004519molecular_functionendonuclease activity
D0009036molecular_functiontype II site-specific deoxyribonuclease activity
D0009307biological_processDNA restriction-modification system
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG I 2222
ChainResidue
BASP140
BACY3002
BMG3333
BHOH3345
BHOH3403
IDC5
IHOH259

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG J 4444
ChainResidue
AMG5555
AHOH5562
AHOH5593
FHOH22
JDC5
AASP140
AACY2001

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG K 6666
ChainResidue
CASP140
CACY4003
CMG7777
CHOH7779
CHOH7780
KDC5
KHOH271

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG L 8888
ChainResidue
DASP140
DHOH1026
DHOH1109
DHOH1118
DACY5004
DMG9999
LDC5

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 5555
ChainResidue
AASP140
ACYS186
AACY2001
AHOH5564
JDC5
JHOH221
JMG4444

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ACY A 2001
ChainResidue
AASP140
ASER185
ACYS186
ALYS187
AASN197
AALA198
AMG5555
AHOH5562
AHOH5593
JDC5
JHOH221
JMG4444

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG B 3333
ChainResidue
BASP140
BCYS186
BACY3002
BHOH3390
IDC5
IHOH57
IMG2222

site_idAC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ACY B 3002
ChainResidue
BASP140
BSER185
BCYS186
BLYS187
BASN197
BALA198
BMG3333
BHOH3384
BHOH3403
IDC5
IHOH57
IHOH259
IMG2222

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG C 7777
ChainResidue
CASP140
CCYS186
CACY4003
CHOH7781
KDC5
KHOH328
KMG6666

site_idBC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE ACY C 4003
ChainResidue
CASP140
CSER185
CCYS186
CLYS187
CASN197
CALA198
CGLU201
CMG7777
CHOH7780
CHOH7829
KDC5
KHOH271
KHOH328
KMG6666

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG D 9999
ChainResidue
DASP140
DCYS186
DHOH1022
DACY5004
LDC5
LHOH55
LMG8888

site_idBC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ACY D 5004
ChainResidue
DASN197
DALA198
DHOH1020
DHOH1026
DHOH1109
DMG9999
LDC5
LHOH55
LMG8888
DASP140
DSER185
DCYS186
DLYS187

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
AASP140
ACYS186
BASP140
BCYS186
CASP140
CCYS186
DASP140
DCYS186

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PDB entries from 2024-07-24

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