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1FHF

THE STRUCTURE OF SOYBEAN PEROXIDASE

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005576cellular_componentextracellular region
A0006979biological_processresponse to oxidative stress
A0020037molecular_functionheme binding
A0042744biological_processhydrogen peroxide catabolic process
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
A0140825molecular_functionlactoperoxidase activity
B0004601molecular_functionperoxidase activity
B0005576cellular_componentextracellular region
B0006979biological_processresponse to oxidative stress
B0020037molecular_functionheme binding
B0042744biological_processhydrogen peroxide catabolic process
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
B0140825molecular_functionlactoperoxidase activity
C0004601molecular_functionperoxidase activity
C0005576cellular_componentextracellular region
C0006979biological_processresponse to oxidative stress
C0020037molecular_functionheme binding
C0042744biological_processhydrogen peroxide catabolic process
C0046872molecular_functionmetal ion binding
C0098869biological_processcellular oxidant detoxification
C0140825molecular_functionlactoperoxidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 501
ChainResidue
AASP43
AVAL46
AGLY48
AASP50
ASER52
AVAL53

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 502
ChainResidue
AGLN227
AASP229
ATHR170
AASP221
ATHR224

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 501
ChainResidue
BASP43
BVAL46
BGLY48
BASP50
BSER52
BVAL53

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA B 502
ChainResidue
BTHR170
BASP221
BTHR224
BGLN227
BASP229

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 501
ChainResidue
CASP43
CVAL46
CGLY48
CASP50
CSER52
CVAL53

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA C 502
ChainResidue
CTHR170
CASP221
CTHR224
CGLN227
CASP229

site_idAC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM A 350
ChainResidue
AARG31
AALA34
ASER35
AARG38
APHE41
ASER73
APRO139
APHE152
ALEU165
AHIS169
APHE171
AGLY172
AARG173
AALA174
AARG175
ATHR178
ASER245
AHOH1004

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE TRS A 2001
ChainResidue
APHE23
APRO141
AHOH1003

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE TRS A 2002
ChainResidue
ATHR85
AGLU88
AASN89
ALEU297

site_idBC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM B 350
ChainResidue
BARG31
BALA34
BSER35
BARG38
BPHE41
BSER73
BPRO139
BPHE152
BLEU165
BHIS169
BPHE171
BGLY172
BARG173
BALA174
BARG175
BTHR178
BSER245
BHOH3004

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE TRS B 4001
ChainResidue
BPHE23
BPRO141
BHOH3003

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE TRS B 4002
ChainResidue
BTHR85
BGLU88
BASN89
BLEU297

site_idBC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HEM C 350
ChainResidue
CSER245
CHOH5004
CARG31
CALA34
CSER35
CARG38
CPHE41
CSER73
CPRO139
CPHE152
CLEU165
CHIS169
CPHE171
CGLY172
CARG173
CALA174
CARG175
CTHR178

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE TRS C 6001
ChainResidue
CPHE23
CPRO141
CHOH5003

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE TRS C 6002
ChainResidue
CTHR85
CGLU88
CASN89
CLEU297

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. DLVTLSGGHTF
ChainResidueDetails
AASP161-PHE171

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. GAslMRLhFHDC
ChainResidueDetails
AGLY33-CYS44

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
AARG38
AHIS42
AASN70

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
BARG38
BHIS42
BASN70

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
CARG38
CHIS42
CASN70

226707

PDB entries from 2024-10-30

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