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1FFY

INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000166molecular_functionnucleotide binding
A0002161molecular_functionaminoacyl-tRNA editing activity
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004822molecular_functionisoleucine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006418biological_processtRNA aminoacylation for protein translation
A0006428biological_processisoleucyl-tRNA aminoacylation
A0008270molecular_functionzinc ion binding
A0046872molecular_functionmetal ion binding
A0106074biological_processaminoacyl-tRNA metabolism involved in translational fidelity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K T 301
ChainResidue
TC32
TU33
TU36
TA38
THOH1267

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1001
ChainResidue
ACYS886
ACYS889
ACYS906
ACYS909

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1992
ChainResidue
AASP13
AHIS201
AHIS770
AHOH2070

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG T 1201
ChainResidue
THOH1292
THOH1293
THOH1294
THOH1295
THOH1296
THOH1297

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG T 1202
ChainResidue
THOH1298
THOH1299
THOH1300
THOH1301
THOH1302
THOH1303

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG T 1203
ChainResidue
AHOH2198
TA14
THOH1304
THOH1305
THOH1306
THOH1307

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MG T 1204
ChainResidue
TG26
TG43
TA44
THOH1218
THOH1308
THOH1309
THOH1310
THOH1311

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG T 1205
ChainResidue
AASN713
AASN718
AHOH2199
TC25
THOH1312
THOH1313
THOH1314

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG T 1206
ChainResidue
TU8
TA9
THOH1315
THOH1316
THOH1317
THOH1318

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG T 1207
ChainResidue
TG16
TG19
TG59
TU60
THOH1250
THOH1319
THOH1320

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG T 1208
ChainResidue
AASN703
AHOH2200
AHOH2201
TC13
TA14
THOH1321
THOH1322

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG T 1209
ChainResidue
TU47
TC48
TG50
THOH1323
THOH1324
THOH1325
THOH1326

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG T 1210
ChainResidue
TU8
TU12
THOH1318
THOH1327
THOH1328
THOH1329
THOH1330

site_idBC5
Number of Residues19
DetailsBINDING SITE FOR RESIDUE MRC A 1993
ChainResidue
APRO56
APRO57
ATYR58
AHIS64
AGLY66
AASN70
AGLU554
AGLY555
AASP557
AGLN558
AHIS585
AGLY586
APHE587
AVAL588
AMET596
ASER597
AHOH2085
AHOH2116
AHOH2138

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues12
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PyaNGnLHMGHA
ChainResidueDetails
APRO57-ALA68

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues7
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P56690
ChainResidueDetails
AILE51
AASN62
AALA549
AASP550
ATYR552
ALEU553
ALYS580

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLY593

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0007744|PDB:1QU2
ChainResidueDetails
ATYR627
AASP635

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0007744|PDB:1FFY, ECO:0007744|PDB:1QU2
ChainResidueDetails
AALA881
AGLU884
AGLU901
AHIS904

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a8h
ChainResidueDetails
ALYS595
ALYS598

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PDB entries from 2024-11-06

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