1F73
CRYSTAL STRUCTURE ANALYSIS OF N-ACETYLNEURAMINATE LYASE FROM HAEMOPHILUS INFLUENZAE: CRYSTAL FORM III IN COMPLEX WITH SIALIC ACID ALDITOL
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0008747 | molecular_function | N-acetylneuraminate lyase activity |
A | 0016829 | molecular_function | lyase activity |
A | 0019262 | biological_process | N-acetylneuraminate catabolic process |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0008747 | molecular_function | N-acetylneuraminate lyase activity |
B | 0016829 | molecular_function | lyase activity |
B | 0019262 | biological_process | N-acetylneuraminate catabolic process |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0008747 | molecular_function | N-acetylneuraminate lyase activity |
C | 0016829 | molecular_function | lyase activity |
C | 0019262 | biological_process | N-acetylneuraminate catabolic process |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0005975 | biological_process | carbohydrate metabolic process |
D | 0008747 | molecular_function | N-acetylneuraminate lyase activity |
D | 0016829 | molecular_function | lyase activity |
D | 0019262 | biological_process | N-acetylneuraminate catabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HMN A 700 |
Chain | Residue |
A | ALA10 |
A | GLY206 |
A | SER207 |
A | LEU250 |
A | HOH737 |
A | HOH780 |
A | TYR43 |
A | GLY46 |
A | SER47 |
A | THR48 |
A | LYS164 |
A | GLY188 |
A | ASP190 |
A | GLU191 |
site_id | AC2 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HMN B 701 |
Chain | Residue |
B | ALA10 |
B | TYR43 |
B | GLY46 |
B | SER47 |
B | THR48 |
B | LYS164 |
B | GLY188 |
B | ASP190 |
B | GLU191 |
B | GLY206 |
B | SER207 |
B | LEU250 |
B | HOH811 |
B | HOH836 |
site_id | AC3 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE HMN C 702 |
Chain | Residue |
C | ALA10 |
C | TYR43 |
C | GLY46 |
C | SER47 |
C | THR48 |
C | LYS164 |
C | GLY188 |
C | ASP190 |
C | GLU191 |
C | ILE205 |
C | GLY206 |
C | SER207 |
C | LEU250 |
C | HOH750 |
C | HOH825 |
site_id | AC4 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE HMN D 703 |
Chain | Residue |
D | ALA10 |
D | TYR43 |
D | GLY46 |
D | SER47 |
D | THR48 |
D | LYS164 |
D | GLY188 |
D | PHE189 |
D | ASP190 |
D | GLU191 |
D | GLY206 |
D | SER207 |
D | LEU250 |
D | HOH763 |
D | HOH818 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 704 |
Chain | Residue |
B | PHE52 |
B | LEU54 |
B | LYS59 |
B | SER82 |
B | GLU87 |
B | HOH774 |
Functional Information from PROSITE/UniProt
site_id | PS00217 |
Number of Residues | 26 |
Details | SUGAR_TRANSPORT_2 Sugar transport proteins signature 2. VdGLYvGGstgenfmLstEekkeifR |
Chain | Residue | Details |
A | VAL39-ARG64 |
site_id | PS00228 |
Number of Residues | 4 |
Details | TUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MRDL |
Chain | Residue | Details |
A | MET1-LEU4 |
site_id | PS00665 |
Number of Residues | 18 |
Details | DHDPS_1 Dihydrodipicolinate synthase signature 1. GLYvgGSTGENfmlsteE |
Chain | Residue | Details |
A | GLY41-GLU58 |
site_id | PS00666 |
Number of Residues | 31 |
Details | DHDPS_2 Dihydrodipicolinate synthase signature 2. YSIPflTgvnMgieqfgelyknpk.VlGVKFT |
Chain | Residue | Details |
A | TYR136-THR166 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_01237, ECO:0000305|PubMed:11031117 |
Chain | Residue | Details |
A | TYR136 | |
B | TYR136 | |
C | TYR136 | |
D | TYR136 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | ACT_SITE: Schiff-base intermediate with substrate => ECO:0000255|HAMAP-Rule:MF_01237, ECO:0000305|PubMed:11031117 |
Chain | Residue | Details |
A | LYS164 | |
B | LYS164 | |
C | LYS164 | |
D | LYS164 |
site_id | SWS_FT_FI3 |
Number of Residues | 28 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01237 |
Chain | Residue | Details |
A | SER47 | |
B | THR166 | |
B | GLY188 | |
B | ASP190 | |
B | GLU191 | |
B | SER207 | |
C | SER47 | |
C | THR48 | |
C | THR166 | |
C | GLY188 | |
C | ASP190 | |
A | THR48 | |
C | GLU191 | |
C | SER207 | |
D | SER47 | |
D | THR48 | |
D | THR166 | |
D | GLY188 | |
D | ASP190 | |
D | GLU191 | |
D | SER207 | |
A | THR166 | |
A | GLY188 | |
A | ASP190 | |
A | GLU191 | |
A | SER207 | |
B | SER47 | |
B | THR48 |